FFCP PHASE1:Hg19::chr7:150553574..150553583,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=80 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_CU680774,JF432306_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_19_at_ABP1_5end | |||
|id=chr7:150553574..150553583,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.14e-36!3;CL:0000453!1.11e-21!5;CL:0000990!2.51e-12!8;CL:0000451!3.45e-10!10 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.36e-118;3!CL:0000349;1.53e-19;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.20e-118,3;CL:0000349,1.48e-19,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!3.96e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.14e-36!3;UBERON:0000920!1.14e-36!3;UBERON:0003124!2.22e-27!7;UBERON:0005631!4.61e-21!14;UBERON:0000158!4.61e-21!14;UBERON:0001736!4.23e-13!1;UBERON:0006298!4.23e-13!1;UBERON:0000478!2.80e-12!24;UBERON:0002108!1.34e-07!14;UBERON:0001829!3.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.36e-118;3!UBERON:0000920;6.36e-118;3!UBERON:0005631;3.24e-36;10!UBERON:0000158;3.24e-36;10!UBERON:0000478;1.16e-15;24!UBERON:0002114;1.96e-14;2!UBERON:0002108;3.35e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.20e-118,3;UBERON:0003124,2.73e-51,7;UBERON:0005631,3.45e-26,14;UBERON:0000158,3.45e-26,14;UBERON:0000478,1.13e-15,24;UBERON:0002114,2.09e-14,2;UBERON:0002108,3.49e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23300811812344,1.19076871422421,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.930053882193542,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,6.1141248526998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@ABP1 | |||
}} |
Revision as of 20:04, 22 January 2014
Short description: | p19@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 15bp_to_CU680774, JF432306_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.20e-118 | 3 |
extraembryonic cell | 1.48e-19 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.20e-118 | 3 |
chorion | 2.73e-51 | 7 |
extraembryonic membrane | 3.45e-26 | 14 |
membranous layer | 3.45e-26 | 14 |
extraembryonic structure | 1.13e-15 | 24 |
duodenum | 2.09e-14 | 2 |
small intestine | 3.49e-09 | 4 |