FFCP PHASE1:Hg19::chr7:54610028..54610047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAG5 | |||
|association_with_transcript=9bp_to_ENST00000495904,NM_182546,uc003tqc.3,uc010kze.2,uc010kzf.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_VSTM2A_5end | |||
|id=chr7:54610028..54610047,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.09e-16;82 | |||
|ontology_enrichment_disease=DOID:169!5.18e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.65e-78!57;UBERON:0005068!6.65e-78!57;UBERON:0006241!6.65e-78!57;UBERON:0007135!6.65e-78!57;UBERON:0002780!3.70e-70!41;UBERON:0001890!3.70e-70!41;UBERON:0006240!3.70e-70!41;UBERON:0003080!2.80e-68!42;UBERON:0002616!1.46e-67!59;UBERON:0001017!1.15e-66!82;UBERON:0000073!1.99e-66!94;UBERON:0001016!1.99e-66!94;UBERON:0005743!1.11e-65!86;UBERON:0000955!1.41e-64!69;UBERON:0006238!1.41e-64!69;UBERON:0001893!4.92e-63!34;UBERON:0002020!9.04e-63!34;UBERON:0003528!9.04e-63!34;UBERON:0002791!1.91e-60!33;UBERON:0001869!5.20e-59!32;UBERON:0003075!3.02e-55!86;UBERON:0007284!3.02e-55!86;UBERON:0007023!1.51e-54!115;UBERON:0002346!3.10e-52!90;UBERON:0002619!3.77e-49!22;UBERON:0003056!9.31e-47!61;UBERON:0001950!2.45e-44!20;UBERON:0000956!9.91e-43!25;UBERON:0000203!9.91e-43!25;UBERON:0000033!2.50e-36!123;UBERON:0000153!1.06e-35!129;UBERON:0007811!1.06e-35!129;UBERON:0004121!5.12e-34!169;UBERON:0000924!6.56e-33!173;UBERON:0006601!6.56e-33!173;UBERON:0002420!9.52e-22!9;UBERON:0007245!9.52e-22!9;UBERON:0010009!9.52e-22!9;UBERON:0010011!9.52e-22!9;UBERON:0000454!9.52e-22!9;UBERON:0002308!2.12e-21!9;UBERON:0000125!2.12e-21!9;UBERON:0000025!1.22e-19!194;UBERON:0009663!3.88e-17!7;UBERON:0000200!1.09e-16!6;UBERON:0001871!3.25e-16!7;UBERON:0004111!8.14e-16!241;UBERON:0002021!1.68e-14!5;UBERON:0002298!4.27e-14!8;UBERON:0000349!1.55e-13!5;UBERON:0000477!4.49e-12!286;UBERON:0003076!8.39e-12!15;UBERON:0003057!8.39e-12!15;UBERON:0000369!4.35e-11!4;UBERON:0002435!4.35e-11!4;UBERON:0000204!4.35e-11!4;UBERON:0010082!4.35e-11!4;UBERON:0000475!7.39e-11!365;UBERON:0000483!1.27e-09!309;UBERON:0001872!1.91e-09!5;UBERON:0000064!1.91e-09!219;UBERON:0000119!2.07e-09!312;UBERON:0002771!4.70e-09!3;UBERON:0004733!4.83e-09!12;UBERON:0002028!4.83e-09!12;UBERON:0007277!4.83e-09!12;UBERON:0000481!8.13e-09!347;UBERON:0001894!9.21e-09!7;UBERON:0006222!9.21e-09!7;UBERON:0005383!1.34e-08!3;UBERON:0005382!1.34e-08!3;UBERON:0004732!2.87e-08!13;UBERON:0001896!4.32e-08!3;UBERON:0005290!4.32e-08!3;UBERON:0010096!4.32e-08!3;UBERON:0000988!5.40e-08!3;UBERON:0006331!8.41e-08!3;UBERON:0000062!1.92e-07!511;UBERON:0001870!7.03e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.51e-77;22!UBERON:0001869;1.64e-72;32!UBERON:0001950;6.40e-70;20!UBERON:0000956;5.52e-68;25!UBERON:0000203;5.52e-68;25!UBERON:0002791;2.42e-67;32!UBERON:0003528;2.88e-65;34!UBERON:0002020;2.88e-65;34!UBERON:0001893;1.63e-64;34!UBERON:0002780;4.78e-56;41!UBERON:0001890;4.78e-56;41!UBERON:0000073;1.95e-39;53!UBERON:0002616;1.95e-39;53!UBERON:0001017;1.20e-32;75!UBERON:0000955;1.62e-31;68!UBERON:0000200;2.07e-25;6!UBERON:0001016;1.63e-22;83!UBERON:0002021;4.49e-22;5!UBERON:0001871;3.21e-21;6!UBERON:0000349;2.66e-20;5!UBERON:0002420;9.49e-16;9!UBERON:0007245;9.49e-16;9!UBERON:0010009;9.49e-16;9!UBERON:0010011;9.49e-16;9!UBERON:0000454;9.49e-16;9!UBERON:0001872;3.33e-14;5!UBERON:0001870;9.33e-14;3!UBERON:0011216;2.82e-12;132!UBERON:0000125;3.90e-11;9!UBERON:0002308;3.90e-11;9!UBERON:0007023;5.20e-11;114!UBERON:0000369;4.85e-10;4!UBERON:0002435;4.85e-10;4!UBERON:0000204;4.85e-10;4!UBERON:0002771;1.21e-09;2!UBERON:0009663;1.32e-09;7!UBERON:0002702;1.49e-09;2!UBERON:0001954;3.39e-09;2!UBERON:0003022;3.39e-09;2!UBERON:0002421;3.39e-09;2!UBERON:0002600;3.39e-09;2!UBERON:0001876;6.54e-09;2!UBERON:0010314;2.45e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.92e-81,32;UBERON:0002780,5.40e-78,41;UBERON:0001890,5.40e-78,41;UBERON:0003080,5.40e-78,41;UBERON:0006240,5.40e-78,41;UBERON:0002619,1.38e-77,22;UBERON:0001049,3.07e-77,56;UBERON:0005068,3.07e-77,56;UBERON:0006241,3.07e-77,56;UBERON:0007135,3.07e-77,56;UBERON:0001893,2.03e-76,34;UBERON:0003528,5.05e-76,34;UBERON:0002020,5.05e-76,34;UBERON:0002791,6.50e-75,32;UBERON:0000073,3.19e-72,53;UBERON:0002616,3.19e-72,53;UBERON:0001950,6.31e-70,20;UBERON:0000956,5.10e-68,25;UBERON:0000203,5.10e-68,25;UBERON:0000955,1.91e-65,68;UBERON:0006238,1.91e-65,68;UBERON:0001017,1.55e-64,81;UBERON:0001016,3.12e-64,89;UBERON:0003075,1.46e-50,82;UBERON:0007284,1.46e-50,82;UBERON:0003056,1.50e-50,61;UBERON:0002346,7.14e-48,86;UBERON:0010371,2.64e-38,104;UBERON:0007023,1.27e-34,114;UBERON:0011216,1.92e-31,223;UBERON:0010314,1.36e-30,132;UBERON:0004121,7.60e-30,171;UBERON:0000924,7.60e-30,171;UBERON:0006601,7.60e-30,171;UBERON:0000200,1.79e-25,6;UBERON:0002021,5.23e-22,5;UBERON:0001871,2.89e-21,6;UBERON:0000349,1.77e-20,5;UBERON:0000025,5.95e-20,192;UBERON:0002420,8.54e-16,9;UBERON:0007245,8.54e-16,9;UBERON:0010009,8.54e-16,9;UBERON:0010011,8.54e-16,9;UBERON:0000454,8.54e-16,9;UBERON:0004111,2.38e-14,240;UBERON:0001872,3.01e-14,5;UBERON:0001870,9.55e-14,3;UBERON:0000125,3.90e-11,9;UBERON:0002308,3.90e-11,9;UBERON:0000369,4.56e-10,4;UBERON:0002435,4.56e-10,4;UBERON:0000204,4.56e-10,4;UBERON:0010082,4.56e-10,4;UBERON:0002771,1.29e-09,2;UBERON:0009663,1.41e-09,7;UBERON:0002702,1.53e-09,2;UBERON:0000483,1.57e-09,306;UBERON:0000119,2.32e-09,309;UBERON:0001954,3.12e-09,2;UBERON:0003022,3.12e-09,2;UBERON:0002421,3.12e-09,2;UBERON:0002600,3.12e-09,2;UBERON:0001876,4.92e-09,2;UBERON:0005423,5.46e-07,581;UBERON:0000923,6.73e-07,560;UBERON:0010316,6.73e-07,560;UBERON:0005291,6.73e-07,560;UBERON:0006598,6.73e-07,560;UBERON:0010317,6.73e-07,560;UBERON:0002532,6.73e-07,560;UBERON:0002050,8.84e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.66231869737023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.81338832821025,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,5.00947730073997,1.99613798001194,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0.885741385813839,3.97968247463846,0,0.110579259931225,0,4.8264787373874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.471807930864739,0,1.40558667435203,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.90392296312213,0,0,7.15411994301429,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,2.45166131000836,0,0,0,0,0,6.01420610914444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80996138906171,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,6.71144456960797,3.3801551290755,1.14681839138014,0.554645257684261,1.24192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17994403148981,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37156359475337,0.539124056983409,0,1.20130602011215,0,0,0,0,0,0,2.40171224485641,0,0,4.62450420694509,7.08482881627925,2.23487402680012,7.99953820538945,5.04143392443436,11.1343176467391,3.71393984953257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47054435408997,6.24862478891078,4.54710952302605,5.26351224609427,0,0,0.496211178389294,0,0,0,0,1.82089681270989,0.227662191351298,0,0,0,0.543757863814654,4.99873079077653,0,0,0.078493092850514,3.29942738823604,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,4.07599677630019,0.0771741581079447,0.218559560503957,0,0,0.707029641304878,1.76677620403451,0,3.3812458206672,0,0,0,0,0,0,0,2.92134555298607,0.458729283404541,0.143339583151451,0,6.18722560737324,4.36350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,1.24119595034274,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@VSTM2A | |||
}} |
Revision as of 17:03, 22 January 2014
Short description: | p7@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 9bp_to_ENST00000495904, NM_182546, uc003tqc.3, uc010kze.2, uc010kzf.2_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | Q8TAG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data