FFCP PHASE1:Hg19::chr7:20257403..20257421,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2140 | |||
|description=CAGE_peak_at_chr7:20257403..20257421,+ | |||
|id=chr7:20257403..20257421,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.92e-10!43;CL:0000223!3.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.33e-13;1!CL:0000164;1.33e-13;1!CL:0000502;1.33e-13;1!CL:0000172;1.33e-13;1!CL:0000173;1.33e-13;1!CL:0002535;9.25e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.42e-13,1;CL:0000164,1.42e-13,1;CL:0000502,1.42e-13,1;CL:0000172,1.42e-13,1;CL:0000173,1.42e-13,1;CL:0002351,1.42e-13,1;CL:0002535,9.25e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.33e-13;1 | |||
|ontology_enrichment_disease=DOID:305!1.16e-08!106;DOID:299!1.27e-08!25;DOID:3119!7.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.33e-13;1!DOID:4468;1.20e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.42e-13,1;DOID:4468,1.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.48e-08!129;UBERON:0004185!1.48e-08!129;UBERON:0000344!7.98e-08!12;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0004119!1.87e-07!169;UBERON:0000925!1.87e-07!169;UBERON:0006595!1.87e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.87e-23;4!UBERON:0006955;9.25e-08;2!UBERON:0004801;9.25e-08;2!UBERON:0000160;7.16e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.77e-23,4;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0000160,7.09e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,0.985207073399349,0.865818594450472,0,0,0,0,0,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,1.35359883872224,0.616122696835318,0,0,0.73886140225013,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,10.077309914171,0,1.35393286007176,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,3.59112177950125,0.565412285735763,0,0,0.530745387020035,0,0,0,0,0,0,0,0.182454789215666,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,1.65491985328316,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0.688859918643263,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,1.8328549483524,0,0,0,0.490751168076215,0.975343399858155,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,9.35969630113376,4.16740453782901,2.84127428655144,4.70317296361523,0,1.41405928260976,0,0,0,0,0,0,0.399764623699716,0,0,0.561689566824178,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.502055437748735,0,0.488419611665847,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr7:20257403..20257421,+ | |||
}} |
Revision as of 15:54, 22 January 2014
Short description: | p@chr7:20257403..20257421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:20257403..20257421, + |
Coexpression cluster: | C2140_argyrophil_smallcell_small_duodenum_trachea_colon_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.42e-13 | 1 |
enteroendocrine cell | 1.42e-13 | 1 |
type D enteroendocrine cell | 1.42e-13 | 1 |
somatostatin secreting cell | 1.42e-13 | 1 |
pancreatic D cell | 1.42e-13 | 1 |
progenitor cell of endocrine pancreas | 1.42e-13 | 1 |
epithelial cell of cervix | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.77e-23 | 4 |
uterine epithelium | 9.25e-08 | 2 |
cervix epithelium | 9.25e-08 | 2 |
intestine | 7.09e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.42e-13 | 1 |
clear cell adenocarcinoma | 1.20e-07 | 2 |