FFCP PHASE1:Hg19::chr6:166825362..166825375,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_at_chr6:166825362..166825375,+ | |||
|id=chr6:166825362..166825375,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.85e-33!18;CL:0000789!1.85e-33!18;CL:0002420!1.85e-33!18;CL:0002419!1.85e-33!18;CL:0000790!1.85e-33!18;CL:0000084!3.10e-23!25;CL:0000827!3.10e-23!25;CL:0000624!1.23e-22!6;CL:0000625!1.66e-16!11;CL:0000838!5.38e-15!52;CL:0000542!1.22e-14!53;CL:0000051!1.22e-14!53;CL:0000898!1.06e-12!3;CL:0000623!1.08e-11!3;CL:0000825!1.08e-11!3;CL:0000842!1.12e-11!3;CL:0000738!1.32e-09!140;CL:0000815!5.86e-09!2;CL:0000792!5.86e-09!2;CL:0002677!5.86e-09!2;CL:0000224!7.19e-09!4;CL:0002087!8.77e-09!119;CL:0000037!7.79e-07!172;CL:0000566!7.79e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000898;3.63e-21;3!CL:0000895;1.65e-16;1!CL:0000624;4.37e-11;6!CL:0000815;6.42e-09;2!CL:0000792;6.42e-09;2!CL:0002677;6.42e-09;2!CL:0000791;3.39e-08;18!CL:0000789;3.39e-08;18!CL:0002419;3.39e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,4.02e-21,3;CL:0000810,1.93e-16,1;CL:0000895,1.93e-16,1;CL:0002436,1.93e-16,1;CL:0002427,1.93e-16,1;CL:0002428,1.93e-16,1;CL:0002429,1.93e-16,1;CL:0002433,1.93e-16,1;CL:0002431,1.93e-16,1;CL:0002432,1.93e-16,1;CL:0000624,4.60e-11,6;CL:0000815,6.42e-09,2;CL:0000792,6.42e-09,2;CL:0002677,6.42e-09,2;CL:0000893,6.94e-09,2;CL:0002489,6.94e-09,2;CL:0000809,6.94e-09,2;CL:0000808,6.94e-09,2;CL:0000894,6.94e-09,2;CL:0000806,6.94e-09,2;CL:0000807,6.94e-09,2;CL:0000805,6.94e-09,2;CL:0002425,6.94e-09,2;CL:0000791,3.23e-08,18;CL:0000789,3.23e-08,18;CL:0002420,3.23e-08,18;CL:0002419,3.23e-08,18;CL:0000790,3.23e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002427;1.65e-16;1!CL:0002425;6.42e-09;2!CL:0000790;3.39e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.28e-15!15;UBERON:0000179!5.28e-15!15;UBERON:0000463!5.28e-15!15;UBERON:0002370!5.87e-10!4;UBERON:0005058!5.87e-10!4;UBERON:0009113!5.87e-10!4;UBERON:0003295!5.87e-10!4;UBERON:0005562!5.87e-10!4;UBERON:0004177!3.00e-09!7;UBERON:0007023!5.11e-07!115;UBERON:0003351!9.45e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.58e-32;2!UBERON:0005058;4.58e-32;2!UBERON:0009113;4.58e-32;2!UBERON:0004177;1.85e-13;5!UBERON:0005057;1.85e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.23e-35,4;UBERON:0005058,4.23e-35,4;UBERON:0009113,4.23e-35,4;UBERON:0003295,4.23e-35,4;UBERON:0005562,4.23e-35,4;UBERON:0003351,1.15e-23,6;UBERON:0004177,2.17e-20,7;UBERON:0005057,2.17e-20,7;UBERON:0000974,1.77e-14,10;UBERON:0003408,1.77e-14,10;UBERON:0001042,1.77e-14,10;UBERON:0009145,1.77e-14,10;UBERON:0006562,3.21e-13,11;UBERON:0009722,3.21e-13,11;UBERON:0007690,3.21e-13,11;UBERON:0008814,2.64e-08,18;UBERON:0001557,6.78e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,1.30368906653436,0.473447805734733,0,0.111410456885174,0.589211814949674,1.32920336750173,0,0,0,0,0.276350017785848,0,1.92772532110679,2.40786745280742,1.04535523804977,0,1.14966148080576,1.03088233644789,2.27717722817553,0,0,1.90090408889675,0.602300476311091,0.76791966692651,0,0.710331756132051,0,0.80642697289893,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,2.1314340245882,2.11054028605917,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:166825362..166825375,+ | |||
}} |
Revision as of 15:10, 22 January 2014
Short description: | p@chr6:166825362..166825375, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:166825362..166825375, + |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.23e-35 | 4 |
hemolymphoid system gland | 4.23e-35 | 4 |
thymic region | 4.23e-35 | 4 |
pharyngeal gland | 4.23e-35 | 4 |
thymus primordium | 4.23e-35 | 4 |
pharyngeal epithelium | 1.15e-23 | 6 |
hemopoietic organ | 2.17e-20 | 7 |
immune organ | 2.17e-20 | 7 |
neck | 1.77e-14 | 10 |
gland of gut | 1.77e-14 | 10 |
chordate pharynx | 1.77e-14 | 10 |
pharyngeal region of foregut | 1.77e-14 | 10 |
pharynx | 3.21e-13 | 11 |
entire pharyngeal arch endoderm | 3.21e-13 | 11 |
early pharyngeal endoderm | 3.21e-13 | 11 |
pharyngeal arch system | 2.64e-08 | 18 |
upper respiratory tract | 6.78e-08 | 19 |