FFCP PHASE1:Hg19::chr6:122931313..122931328,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5570 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9018 | |||
|TSSclassifier=strong | |||
|UniProt=Q9C010 | |||
|association_with_transcript=-48bp_to_ENST00000368448,ENST00000368452,ENST00000392490,NM_032471,NM_181795,uc003pza.2,uc003pzb.2_5end | |||
|description=CAGE_peak_6_at_PKIB_5end | |||
|id=chr6:122931313..122931328,+ | |||
|ontology_enrichment_celltype=CL:0000990!6.09e-11!8;CL:1000507!3.71e-09!12;CL:1000494!3.71e-09!12;CL:0000453!9.36e-09!5;CL:0000451!1.44e-08!10;CL:0000075!4.66e-08!27;CL:0002077!5.78e-07!33;CL:0000840!6.75e-07!5;CL:0001029!6.75e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.63e-23;2!CL:0001016;2.63e-23;2!CL:0000453;1.38e-20;5!CL:0000990;6.22e-20;8!CL:0000840;2.88e-17;5!CL:0000451;2.29e-16;10!CL:0000239;1.32e-15;3!CL:1000615;1.32e-15;3!CL:0002306;1.32e-15;3!CL:1000507;1.78e-10;10!CL:1000494;1.78e-10;10!CL:1000449;3.73e-07;15!CL:0000123;8.52e-07;2!CL:0002535;8.52e-07;2!CL:0000242;8.52e-07;2!CL:0000075;9.86e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.99e-23,2;CL:0001016,1.99e-23,2;CL:0000453,7.81e-21,5;CL:0000990,4.53e-20,8;CL:0000840,2.81e-17,5;CL:0001029,2.81e-17,5;CL:0000451,1.77e-16,10;CL:0000239,1.65e-15,3;CL:1000615,1.65e-15,3;CL:0002306,1.65e-15,3;CL:1000507,1.90e-10,10;CL:1000494,1.90e-10,10;CL:1000449,3.90e-07,15;CL:0002535,6.42e-07,2;CL:0000242,9.02e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.02e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!3.71e-09!12;UBERON:0001231!3.71e-09!12;UBERON:0004810!3.71e-09!12;UBERON:0003056!7.75e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.32e-15;3!UBERON:0007685;1.32e-15;3!UBERON:0004134;1.32e-15;3!UBERON:0001874;2.46e-12;1!UBERON:0004211;1.78e-10;10!UBERON:0009773;1.78e-10;10!UBERON:0001231;1.78e-10;10!UBERON:0004810;1.78e-10;10!UBERON:0006555;3.73e-07;15!UBERON:0004819;3.73e-07;15!UBERON:0001285;3.73e-07;15!UBERON:0007684;3.73e-07;15!UBERON:0006955;8.52e-07;2!UBERON:0004801;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.65e-15,3;UBERON:0007685,1.65e-15,3;UBERON:0004134,1.65e-15,3;UBERON:0001874,1.57e-12,1;UBERON:0004810,1.90e-10,10;UBERON:0004211,3.90e-07,15;UBERON:0009773,3.90e-07,15;UBERON:0001231,3.90e-07,15;UBERON:0001285,3.90e-07,15;UBERON:0007684,3.90e-07,15;UBERON:0004208,3.90e-07,15;UBERON:0006955,6.42e-07,2;UBERON:0004801,6.42e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,1.29818957461873,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.491953754172454,0.171567810298526,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0,0,0,0,0.492663237895943,0.528290604079356,0.207328115540772,0.144119953416961,0,0.380987365753014,0,1.17217447210047,0,0.411309970813294,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0.231046011313244,0,1.46139224653261,0.949964660035881,0,0,0,0,0.812839312631559,0.501689773854853,1.01950509218015,1.66215201785745,0.223874754722178,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.76352923497993,0,0,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,2.86470537193757,0.0874599999961957,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,0.774054819518572,1.18219047581419,0,0,0,0,0.569710279235006,0.23056390438806,0.269272933229316,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.706765357169704,0,0.995261931078505,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,2.69968669861801,1.5476039091159,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.310482014706917,0,0,0.303298235083296,0,0.470531639396343,1.40500471742064,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.930053882193542,1.79921933681429,0,0,0.211312123358627,0,0,0,0,0,0,0,0.639471856518258,0,0.314531883711793,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,3.10458295569236,0,0,1.22345519358297,0.131545547125698,0,2.00216523405724,0.313972371402056,1.72827148907602,0.560544326627578,0,0,0,0.142953088353313,2.52821778772363,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0.301925687133347,0.463044948647668,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0,0,0,0,0,0.342233301085281,0,0.215166616178029,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p6@PKIB | |||
}} |
Revision as of 13:39, 22 January 2014
Short description: | p6@PKIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PKIB_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000368448, ENST00000368452, ENST00000392490, NM_032471, NM_181795, uc003pza.2, uc003pzb.2_5end |
EntrezGene: | PKIB |
HGNC: | 9018 |
UniProt: | Q9C010 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.99e-23 | 2 |
immature CD1a-positive Langerhans cell | 1.99e-23 | 2 |
Langerhans cell | 7.81e-21 | 5 |
conventional dendritic cell | 4.53e-20 | 8 |
immature conventional dendritic cell | 2.81e-17 | 5 |
common dendritic progenitor | 2.81e-17 | 5 |
dendritic cell | 1.77e-16 | 10 |
brush border epithelial cell | 1.65e-15 | 3 |
kidney cortex tubule cell | 1.65e-15 | 3 |
epithelial cell of proximal tubule | 1.65e-15 | 3 |
kidney tubule cell | 1.90e-10 | 10 |
nephron tubule epithelial cell | 1.90e-10 | 10 |
epithelial cell of nephron | 3.90e-07 | 15 |
epithelial cell of cervix | 6.42e-07 | 2 |
Merkel cell | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.65e-15 | 3 |
region of nephron tubule | 1.65e-15 | 3 |
proximal tubule | 1.65e-15 | 3 |
putamen | 1.57e-12 | 1 |
nephron tubule epithelium | 1.90e-10 | 10 |
nephron epithelium | 3.90e-07 | 15 |
renal tubule | 3.90e-07 | 15 |
nephron tubule | 3.90e-07 | 15 |
nephron | 3.90e-07 | 15 |
uriniferous tubule | 3.90e-07 | 15 |
nephrogenic mesenchyme | 3.90e-07 | 15 |
uterine epithelium | 6.42e-07 | 2 |
cervix epithelium | 6.42e-07 | 2 |