FFCP PHASE1:Hg19::chr6:68599042..68599067,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003pes.1,uc003pet.1_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_1_at_uc003pes.1_5end,CAGE_peak_1_at_uc003pet.1_5end | |||
|id=chr6:68599042..68599067,- | |||
|ontology_enrichment_celltype=CL:0000763!3.43e-20!112;CL:0000049!3.43e-20!112;CL:0002032!1.60e-14!165;CL:0000837!1.60e-14!165;CL:0000037!4.84e-14!172;CL:0000566!4.84e-14!172;CL:0000988!4.00e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.45e-10;100!CL:0000054;1.67e-08;2!CL:0000137;1.67e-08;2!CL:0000092;1.67e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.79e-22,108;CL:0000049,4.79e-22,108;CL:0002032,9.76e-15,161;CL:0000837,9.76e-15,161;CL:0000037,8.22e-14,168;CL:0000988,9.88e-13,177;CL:0000054,1.67e-08,2;CL:0000137,1.67e-08,2;CL:0000092,1.67e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000049;3.80e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!1.91e-45!39;DOID:8692!1.28e-44!31;DOID:2531!3.30e-38!51;DOID:0060083!3.30e-38!51;DOID:0050686!7.22e-17!137;DOID:14566!5.30e-15!239;DOID:1036!2.78e-14!8;DOID:162!3.09e-14!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.00e-75;31!DOID:1240;1.66e-56;39!DOID:2531;3.88e-37;51!DOID:0060083;3.88e-37;51!DOID:1036;2.41e-30;8!DOID:0050686;1.59e-08;137!DOID:200;1.67e-08;2!DOID:4305;1.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.02e-77,31;DOID:1240,6.05e-70,39;DOID:2531,5.98e-60,51;DOID:0060083,5.98e-60,51;DOID:1036,2.45e-30,8;DOID:0050686,2.41e-28,137;DOID:14566,5.24e-21,239;DOID:162,3.35e-19,235;DOID:200,1.67e-08,2;DOID:4305,1.67e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0.0774672005803016,0,0.587200878669695,0,0.200544447470142,0,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0,0,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56869953835371,0,0,0,0,7.1252252313706,9.25363516141736,0.812839312631559,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,26.949435947374,0,0.185803175125719,0,0.0711418433484141,0.318852545457645,313.140033778089,0.383010740264733,2.32840940996271,1167.98974110785,194.0308500764,228.919383070292,16.7647488477135,2.50634477090067,0,505.049496201135,0.201799707191048,0.425846237690326,6.52660155035953,1952.51505718025,1524.35267528681,2376.59917454442,885.303460266645,449.069158493026,2.46174797895425,31.913770060166,0.99921590399346,556.898670097006,0,0,0,4.23484860254418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.8795001372423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,22.6744691135532,0.23056390438806,0,0,0,0,0,3.06579894587209,1296.8138980793,2.32696354660219,1138.13010781368,1033.44561838881,988.469147287714,824.100461221136,1982.73382278022,0,35.0950537542168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,71.5372602130763,0,0,0.0801588202515337,0,0,0,0,0,0,0.372757606696298,0,0.135904206073614,0.104602846312333,0.305994652908965,51.1442544125688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,404.059387128246,1.19271615249795,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0.926089897295336,0.489473409012935,0.358177682162975,0,0,0,0,0,0,0,2.12701969324168,0,0,0,0,1.31043939538565,0,0,0,11.5227068069672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,12.5856091504165,0,0,0.0752103283492573,1.0085253435176,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0.685952037749674,0,0,0,0,0,0,1.40136081656895,0,3.45484145949794,0,0,0,0,0,0,4.14432328326074,0.3414369541879,2.07377898544228,0,2.721636016803,2.55640214277473,0,1.3746412112643,4.03268301363616,0,0,0.196300467230486,0,0,0,0,0,0,0,2.37840181555137,0,1.31928620094515,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.454672189309436,0.535928260312357,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p1@uc003pes.1,p1@uc003pet.1 | |||
}} |
Revision as of 12:32, 22 January 2014
Short description: | p1@uc003pes.1, p1@uc003pet.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003pes.1_5end, CAGE_peak_1_at_uc003pet.1_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_uc003pes.1, uc003pet.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.79e-22 | 108 |
common myeloid progenitor | 4.79e-22 | 108 |
hematopoietic oligopotent progenitor cell | 9.76e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.76e-15 | 161 |
hematopoietic stem cell | 8.22e-14 | 168 |
hematopoietic cell | 9.88e-13 | 177 |
bone matrix secreting cell | 1.67e-08 | 2 |
osteocyte | 1.67e-08 | 2 |
osteoclast | 1.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.02e-77 | 31 |
leukemia | 6.05e-70 | 39 |
hematologic cancer | 5.98e-60 | 51 |
immune system cancer | 5.98e-60 | 51 |
chronic leukemia | 2.45e-30 | 8 |
organ system cancer | 2.41e-28 | 137 |
disease of cellular proliferation | 5.24e-21 | 239 |
cancer | 3.35e-19 | 235 |
giant cell tumor | 1.67e-08 | 2 |
bone giant cell tumor | 1.67e-08 | 2 |