FFCP PHASE1:Hg19::chr6:57087225..57087229,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=51715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14263 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-124bp_to_uc010kac.2,uc010kad.2_5end | |||
|description=CAGE_peak_12_at_RAB23_5end | |||
|id=chr6:57087225..57087229,- | |||
|ontology_enrichment_celltype=CL:0002620!1.64e-12!23;CL:0000055!2.03e-11!180;CL:0000057!1.01e-09!75;CL:0002622!2.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.05e-34;1!CL:0002552;2.08e-27;5!CL:0002540;8.48e-07;6!CL:0002556;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.06e-34,1;CL:0002552,1.82e-27,5;CL:0002556,7.58e-07,6;CL:0002540,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.80e-10!5;DOID:450!3.80e-10!5;DOID:66!3.80e-10!5;DOID:423!3.80e-10!5;DOID:0080000!3.80e-10!5;DOID:11722!3.80e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.53e-13!95;UBERON:0000162!4.39e-11!14;UBERON:0001353!4.39e-11!14;UBERON:0000163!4.39e-11!14;UBERON:0006866!4.39e-11!14;UBERON:0000164!4.39e-11!14;UBERON:0000931!4.39e-11!14;UBERON:0004122!3.27e-10!15;UBERON:0001046!1.37e-09!19;UBERON:0002097!3.39e-08!40;UBERON:0000161!1.45e-07!35;UBERON:0005156!5.46e-07!59;UBERON:0000990!5.46e-07!59;UBERON:0002199!6.88e-07!45;UBERON:0002416!6.88e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;9.07e-18;2!UBERON:0002012;9.07e-18;2!UBERON:0008886;9.07e-18;2!UBERON:0001828;1.44e-17;8!UBERON:0000165;2.13e-11;28!UBERON:0003729;3.21e-11;13!UBERON:0000161;5.54e-08;19!UBERON:0000166;5.54e-08;19!UBERON:0002118;6.55e-08;5!UBERON:0000344;1.25e-07;20!UBERON:0001758;8.48e-07;6!UBERON:0003672;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.07e-17,2;UBERON:0007497,1.07e-17,2;UBERON:0003643,1.07e-17,2;UBERON:0003504,1.07e-17,2;UBERON:0003469,1.07e-17,2;UBERON:0003496,1.07e-17,2;UBERON:0002012,1.07e-17,2;UBERON:0008886,1.07e-17,2;UBERON:0007303,1.07e-17,2;UBERON:0002061,1.07e-17,2;UBERON:0005432,1.07e-17,2;UBERON:0004363,1.07e-17,2;UBERON:0001828,1.33e-17,8;UBERON:0004145,2.89e-12,3;UBERON:0003729,3.05e-11,13;UBERON:0000165,4.48e-11,29;UBERON:0000930,4.48e-11,29;UBERON:0000033,4.89e-10,56;UBERON:0000153,4.07e-09,62;UBERON:0007811,4.07e-09,62;UBERON:0002118,6.55e-08,5;UBERON:0003498,7.01e-08,5;UBERON:0005985,7.01e-08,5;UBERON:0000344,1.21e-07,20;UBERON:0000166,4.94e-07,22;UBERON:0001758,7.58e-07,6;UBERON:0003672,7.58e-07,6;UBERON:0001444,7.75e-07,49;UBERON:0010188,8.97e-07,6;UBERON:0002539,8.97e-07,6;UBERON:0003351,8.97e-07,6;UBERON:0008816,8.97e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0,0,0,0,0,0.309977343527296,3.56400857184616,1.23633464639278,0,0,0.168336113954066,0,0,0,0,1.95309476578576,0,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.412210116953756,0.515281080091258,0,0.168776332241266,0.487185025805993,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,1.0062716070103,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0.150257608997218,0,0,0,0,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.488965776731466,0,0.665756774185513,0,0 | |||
|short_description=p12@RAB23 | |||
}} |
Revision as of 12:28, 22 January 2014
Short description: | p12@RAB23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_RAB23_5end |
Coexpression cluster: | NA |
Association with transcript: | -124bp_to_uc010kac.2, uc010kad.2_5end |
EntrezGene: | RAB23 |
HGNC: | 14263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.06e-34 | 1 |
fibroblast of gingiva | 1.82e-27 | 5 |
fibroblast of periodontium | 7.58e-07 | 6 |
mesenchymal stem cell of the bone marrow | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.07e-17 | 2 |
developing epithelial placode | 1.07e-17 | 2 |
respiratory system arterial blood vessel | 1.07e-17 | 2 |
respiratory system blood vessel | 1.07e-17 | 2 |
respiratory system artery | 1.07e-17 | 2 |
head blood vessel | 1.07e-17 | 2 |
pulmonary artery | 1.07e-17 | 2 |
pulmonary vascular system | 1.07e-17 | 2 |
pharyngeal vasculature | 1.07e-17 | 2 |
truncus arteriosus | 1.07e-17 | 2 |
aortic sac | 1.07e-17 | 2 |
pharyngeal arch artery | 1.07e-17 | 2 |
gingiva | 1.33e-17 | 8 |
outflow tract | 2.89e-12 | 3 |
mouth mucosa | 3.05e-11 | 13 |
mouth | 4.48e-11 | 29 |
stomodeum | 4.48e-11 | 29 |
head | 4.89e-10 | 56 |
anterior region of body | 4.07e-09 | 62 |
craniocervical region | 4.07e-09 | 62 |
right ovary | 6.55e-08 | 5 |
heart blood vessel | 7.01e-08 | 5 |
coronary vessel | 7.01e-08 | 5 |
mucosa | 1.21e-07 | 20 |
oral opening | 4.94e-07 | 22 |
periodontium | 7.58e-07 | 6 |
dentition | 7.58e-07 | 6 |
subdivision of head | 7.75e-07 | 49 |
protuberance | 8.97e-07 | 6 |
pharyngeal arch | 8.97e-07 | 6 |
pharyngeal epithelium | 8.97e-07 | 6 |
embryonic head | 8.97e-07 | 6 |