FFCP PHASE1:Hg19::chr5:140743737..140743773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8703 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5G8 | |||
|association_with_transcript=-124bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | |||
|coexpression_cluster_id=C1328 | |||
|description=CAGE_peak_1_at_PCDHGA5_5end | |||
|id=chr5:140743737..140743773,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;4.71e-09;6!CL:0000153;1.73e-07;9!CL:0000447;1.73e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.37e-09,6;CL:0000138,4.37e-09,6;CL:0000153,1.48e-07,9;CL:0000447,1.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.28e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.44e-40!57;UBERON:0005068!5.44e-40!57;UBERON:0006241!5.44e-40!57;UBERON:0007135!5.44e-40!57;UBERON:0007023!1.68e-39!115;UBERON:0005743!9.80e-39!86;UBERON:0001017!2.00e-38!82;UBERON:0002616!4.13e-36!59;UBERON:0003075!3.41e-35!86;UBERON:0007284!3.41e-35!86;UBERON:0002346!3.38e-34!90;UBERON:0000073!4.76e-32!94;UBERON:0001016!4.76e-32!94;UBERON:0000955!6.06e-32!69;UBERON:0006238!6.06e-32!69;UBERON:0003080!1.81e-28!42;UBERON:0002780!4.22e-28!41;UBERON:0001890!4.22e-28!41;UBERON:0006240!4.22e-28!41;UBERON:0001893!1.01e-24!34;UBERON:0002020!1.40e-24!34;UBERON:0003528!1.40e-24!34;UBERON:0003056!2.99e-24!61;UBERON:0002791!5.05e-24!33;UBERON:0001869!2.87e-23!32;UBERON:0000033!1.34e-22!123;UBERON:0000153!2.22e-22!129;UBERON:0007811!2.22e-22!129;UBERON:0004121!1.17e-20!169;UBERON:0000924!1.64e-20!173;UBERON:0006601!1.64e-20!173;UBERON:0000956!4.76e-18!25;UBERON:0000203!4.76e-18!25;UBERON:0002619!1.97e-17!22;UBERON:0000475!5.91e-16!365;UBERON:0001950!6.85e-16!20;UBERON:0000025!4.87e-15!194;UBERON:0004111!1.02e-13!241;UBERON:0000477!1.61e-13!286;UBERON:0000468!4.34e-13!659;UBERON:0000119!6.33e-13!312;UBERON:0003076!1.88e-12!15;UBERON:0003057!1.88e-12!15;UBERON:0000483!1.91e-12!309;UBERON:0000481!3.78e-11!347;UBERON:0004733!6.22e-10!12;UBERON:0002028!6.22e-10!12;UBERON:0007277!6.22e-10!12;UBERON:0000467!1.54e-09!625;UBERON:0000064!1.99e-09!219;UBERON:0000480!2.04e-09!626;UBERON:0004732!8.53e-09!13;UBERON:0002420!2.39e-08!9;UBERON:0007245!2.39e-08!9;UBERON:0010009!2.39e-08!9;UBERON:0010011!2.39e-08!9;UBERON:0000454!2.39e-08!9;UBERON:0002308!5.54e-08!9;UBERON:0000125!5.54e-08!9;UBERON:0000922!6.37e-08!612;UBERON:0000062!9.28e-08!511;UBERON:0002680!1.17e-07!9;UBERON:0001895!1.17e-07!9;UBERON:0010092!1.17e-07!9;UBERON:0002050!1.17e-07!605;UBERON:0005423!1.17e-07!605;UBERON:0000923!2.34e-07!604;UBERON:0005291!2.34e-07!604;UBERON:0006598!2.34e-07!604;UBERON:0002532!2.34e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.12e-34;53!UBERON:0002616;1.12e-34;53!UBERON:0001893;5.16e-34;34!UBERON:0003528;1.15e-33;34!UBERON:0002020;1.15e-33;34!UBERON:0001869;2.14e-33;32!UBERON:0002791;3.26e-33;32!UBERON:0002780;4.88e-33;41!UBERON:0001890;4.88e-33;41!UBERON:0002619;3.70e-30;22!UBERON:0000956;4.07e-28;25!UBERON:0000203;4.07e-28;25!UBERON:0001950;2.37e-27;20!UBERON:0001017;1.37e-24;75!UBERON:0000955;3.53e-23;68!UBERON:0001016;5.83e-20;83!UBERON:0004733;1.71e-14;12!UBERON:0002028;1.71e-14;12!UBERON:0002420;1.98e-13;9!UBERON:0007245;1.98e-13;9!UBERON:0010009;1.98e-13;9!UBERON:0010011;1.98e-13;9!UBERON:0000454;1.98e-13;9!UBERON:0004732;3.81e-13;13!UBERON:0000125;5.99e-13;9!UBERON:0002308;5.99e-13;9!UBERON:0007023;1.10e-11;114!UBERON:0002680;1.71e-10;9!UBERON:0001895;1.71e-10;9!UBERON:0009663;1.74e-10;7!UBERON:0000200;2.74e-09;6!UBERON:0002298;4.15e-09;6!UBERON:0000349;8.48e-09;5!UBERON:0001872;1.76e-08;5!UBERON:0001871;2.04e-08;6!UBERON:0002021;3.27e-08;5!UBERON:0001894;5.08e-08;7!UBERON:0000369;1.01e-07;4!UBERON:0002435;1.01e-07;4!UBERON:0000204;1.01e-07;4!UBERON:0011216;2.45e-07;132!UBERON:0002037;4.29e-07;6!UBERON:0002784;4.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.94e-66,56;UBERON:0005068,7.94e-66,56;UBERON:0006241,7.94e-66,56;UBERON:0007135,7.94e-66,56;UBERON:0001017,3.63e-63,81;UBERON:0000073,4.86e-61,53;UBERON:0002616,4.86e-61,53;UBERON:0001016,6.91e-55,89;UBERON:0000955,7.81e-52,68;UBERON:0006238,7.81e-52,68;UBERON:0002780,3.18e-47,41;UBERON:0001890,3.18e-47,41;UBERON:0003080,3.18e-47,41;UBERON:0006240,3.18e-47,41;UBERON:0003075,3.20e-43,82;UBERON:0007284,3.20e-43,82;UBERON:0007023,3.49e-42,114;UBERON:0001893,1.52e-40,34;UBERON:0002346,2.16e-40,86;UBERON:0003528,2.71e-40,34;UBERON:0002020,2.71e-40,34;UBERON:0001869,6.24e-38,32;UBERON:0002791,8.50e-38,32;UBERON:0010371,6.18e-32,104;UBERON:0010314,3.74e-31,132;UBERON:0002619,1.20e-30,22;UBERON:0003056,2.05e-29,61;UBERON:0000956,1.40e-28,25;UBERON:0000203,1.40e-28,25;UBERON:0001950,7.26e-28,20;UBERON:0004121,3.74e-26,171;UBERON:0000924,3.74e-26,171;UBERON:0006601,3.74e-26,171;UBERON:0011216,1.95e-21,223;UBERON:0000025,1.42e-20,192;UBERON:0003076,5.84e-19,15;UBERON:0003057,5.84e-19,15;UBERON:0004111,1.43e-17,240;UBERON:0004733,1.71e-14,12;UBERON:0002028,1.71e-14,12;UBERON:0007277,1.71e-14,12;UBERON:0002420,9.59e-14,9;UBERON:0007245,9.59e-14,9;UBERON:0010009,9.59e-14,9;UBERON:0010011,9.59e-14,9;UBERON:0000454,9.59e-14,9;UBERON:0004732,3.80e-13,13;UBERON:0000125,4.32e-13,9;UBERON:0002308,4.32e-13,9;UBERON:0009663,1.09e-10,7;UBERON:0000483,1.11e-10,306;UBERON:0002680,1.78e-10,9;UBERON:0001895,1.78e-10,9;UBERON:0010092,1.78e-10,9;UBERON:0000119,2.19e-10,309;UBERON:0000200,1.74e-09,6;UBERON:0002298,4.37e-09,6;UBERON:0000349,6.35e-09,5;UBERON:0001871,1.13e-08,6;UBERON:0001872,1.32e-08,5;UBERON:0002021,2.89e-08,5;UBERON:0001894,5.45e-08,7;UBERON:0006222,5.45e-08,7;UBERON:0000369,8.98e-08,4;UBERON:0002435,8.98e-08,4;UBERON:0000204,8.98e-08,4;UBERON:0010082,8.98e-08,4;UBERON:0002050,2.07e-07,564;UBERON:0000923,3.27e-07,560;UBERON:0010316,3.27e-07,560;UBERON:0005291,3.27e-07,560;UBERON:0006598,3.27e-07,560;UBERON:0010317,3.27e-07,560;UBERON:0002532,3.27e-07,560;UBERON:0002037,4.10e-07,6;UBERON:0006215,4.10e-07,6;UBERON:0002784,5.29e-07,4;UBERON:0000922,5.40e-07,592;UBERON:0005423,8.09e-07,581 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.12763523276777,0,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.37129905888014,0.331397375727916,3.36162573225888,0.602694528023977,1.46062018077475,2.43966399395253,1.47745269692145,0.612002073732759,4.38836610069323,1.43117993565528,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,4.51204119572301,1.44846518960824,3.1811437882044,1.45990461090791,0.189069634328136,0.221729397462564,0.087834785693126,1.5062593682237,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.12663051166458,0.794455084879313,1.72101972449288,0,1.12135520028461,1.06748995729705,0,1.24484414159907,0,0,1.21085942115945,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.309977343527296,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,1.2813443329114,1.27159140695737,0.600182192168805,0.515262646192195,1.03056216018252,0.744467425326359,0.675105328965065,0.584622030967192,1.26216887122057,1.28869858099219,0.646584227275248,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0.895585227028483,0,0,0,0,0,0,0,0.444485260045183,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.1466765716419,1.03417372606222,0,0,3.19125739901845,0,0.257207374262142,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0,0,0,0,4.31324739884849,8.04033550838797,0,0.868687840005475,0,0.716243852959582,0,0,0,0,3.81141936333695,5.20559415430487,1.54657762555539,4.85797169469611,3.18969375826582,0,0,0,3.6807447515742,0,0.542530047399471,1.24782516918484,0.356857977594324,0.473107245101804,2.92853537481783,1.80567659836631,2.27407504055985,0,1.99267679560631,0,0.173767228936166,1.37060810223918,1.71571711905428,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,1.18011973463482,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0,0,0,0.773365746336976,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,1.60257664164127,0,0,0,0.10115778085555,0,1.25924938732256,0,0,0,0,0.74129687641568,0,0,0.316379424718726,0,0.255897791311334,1.28381696410176,0.318203247925937,0,0,0,0.353437207037059,0,1.58510321173008,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0.491245205065606,0,0,1.47775344708365,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.376575203107117,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0.23874448473769,0.296964680832639,0,3.97659059106519,4.92342957436795,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,0,0,1.93866549219044,3.33965153382665,7.98455192004777,0.7812832832557,0,0.724999575434793,0,0,0,0,0,0,6.20018970069687,6.0298219312704,13.7323562685375,12.9377734119533,2.36438095162838,4.60709334023342,0,0,2.92410982314429,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,1.22206028986725,0.296521128680622,0,0,3.77446344691791,0.802577647298789,2.34264445725339,0,0,0,1.57833761139756,0,10.4064738954367,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.581934098930517,27.0946308942906,3.16373037092745,0.137041924646751,0,2.72236422610278,0,0,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,1.77976992559591,0,0,0,2.51354161145029,0.916641696046735,0.717873024576814,0.399358000997982,0,0.446342914883745,2.14987111957524,0.720599767084807,0,0,0,0,0,0,2.38568906942791,4.35850899557042,0.160753148465019,0,0,0,0,4.55621674935185,0,0.394028536495991,1.88836517285993,0,0,0,2.1440859791201,0,0,0,0,1.30634944043764,0,0,0,0.113312091520126,0,0,2.71494208359256,2.11572162788304,0,0,0.961086713109252,3.61569901729232,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,3.54427271986794,3.29470915235301,3.3801551290755,2.86704597845036,3.32787154610557,3.35320575883471,0,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.756154618816195,0,0.443565449968902,0.318593534327405,0,0.310525913752519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| |||
|short_description=p1@PCDHGA5 | |||
}} |
Revision as of 07:53, 22 January 2014
Short description: | p1@PCDHGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHGA5_5end |
Coexpression cluster: | C1328_extraskeletal_cerebellum_brain_duodenum_occipital_parietal_temporal |
Association with transcript: | -124bp_to_ENST00000518069, NM_018918, NM_032054, uc003lju.1, uc011das.1_5end |
EntrezGene: | PCDHGA5 |
HGNC: | 8703 |
UniProt: | Q9Y5G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.37e-09 | 6 |
chondrocyte | 4.37e-09 | 6 |
GAG secreting cell | 1.48e-07 | 9 |
carbohydrate secreting cell | 1.48e-07 | 9 |