FFCP PHASE1:Hg19::chr5:30104096..30104103,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2694 | |||
|description=CAGE_peak_at_chr5:30104096..30104103,- | |||
|id=chr5:30104096..30104103,- | |||
|ontology_enrichment_celltype=CL:0002564!2.31e-15!3;CL:0002150!2.47e-14!3;CL:0000861!2.47e-14!3;CL:0002602!5.13e-11!2;CL:0000128!1.01e-10!7;CL:0000126!1.01e-10!7;CL:0000127!1.01e-10!7;CL:0002453!1.01e-10!7;CL:0002590!2.18e-07!3;CL:0002605!3.38e-07!3;CL:0000708!3.60e-07!3;CL:0002603!6.09e-07!3;CL:0000594!8.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.85e-12;3!CL:0002590;2.07e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,1.85e-12,3;CL:0002590,2.07e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.79e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;9.86e-18;2!DOID:1907;9.86e-18;2!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,7.67e-18,2;DOID:1907,7.67e-18,2;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.52e-34!9;UBERON:0001557!1.69e-15!19;UBERON:0002242!2.31e-15!3;UBERON:0003068!2.31e-15!3;UBERON:0002328!2.31e-15!3;UBERON:0004880!2.31e-15!3;UBERON:0009568!5.13e-11!2;UBERON:0002216!5.13e-11!2;UBERON:0002209!5.13e-11!2;UBERON:0002213!5.13e-11!2;UBERON:0004267!5.13e-11!2;UBERON:0006444!5.13e-11!2;UBERON:0001995!5.13e-11!2;UBERON:0004715!5.13e-11!2;UBERON:0001468!5.13e-11!2;UBERON:0001130!5.13e-11!2;UBERON:0001066!5.13e-11!2;UBERON:0005284!4.51e-09!5;UBERON:0002418!1.30e-07!3;UBERON:0004755!1.30e-07!3;UBERON:0003210!3.60e-07!3;UBERON:0008947!4.29e-07!38;UBERON:0003258!4.29e-07!38;UBERON:0000481!5.93e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-33;9!UBERON:0001557;2.04e-33;9!UBERON:0002242;1.85e-12;3!UBERON:0000065;3.00e-09;44!UBERON:0011135;5.35e-08;5!UBERON:0002216;5.35e-08;5!UBERON:0011134;5.35e-08;5!UBERON:0002209;5.35e-08;5!UBERON:0002213;5.35e-08;5!UBERON:0007844;5.35e-08;5!UBERON:0011138;5.35e-08;5!UBERON:0001130;5.35e-08;5!UBERON:0001066;5.35e-08;5!UBERON:0001468;5.35e-08;5!UBERON:0005284;5.73e-08;5!UBERON:0000072;1.15e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.42e-33,9;UBERON:0001557,2.80e-16,19;UBERON:0002242,1.85e-12,3;UBERON:0003068,1.85e-12,3;UBERON:0002328,1.85e-12,3;UBERON:0004880,1.85e-12,3;UBERON:0008947,1.60e-08,38;UBERON:0003258,1.60e-08,38;UBERON:0011135,5.35e-08,5;UBERON:0002216,5.35e-08,5;UBERON:0011134,5.35e-08,5;UBERON:0002209,5.35e-08,5;UBERON:0002213,5.35e-08,5;UBERON:0005856,5.35e-08,5;UBERON:0005866,5.35e-08,5;UBERON:0005863,5.35e-08,5;UBERON:0007844,5.35e-08,5;UBERON:0011138,5.35e-08,5;UBERON:0001130,5.35e-08,5;UBERON:0001066,5.35e-08,5;UBERON:0001468,5.35e-08,5;UBERON:0005284,5.73e-08,5;UBERON:0000072,5.10e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.990130823680373,0.662794751455832,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,1.34867752062481,0.964044119533928,1.21323370005633,0.435758888184812,0,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,3.00102312635806,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,2.21465597303108,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:30104096..30104103,- | |||
}} |
Revision as of 04:53, 22 January 2014
Short description: | p@chr5:30104096..30104103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:30104096..30104103, - |
Coexpression cluster: | C2694_Nucleus_Anulus_Smooth_Hep2_Fibroblast_Meningeal_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 1.85e-12 | 3 |
smooth muscle cell of the brain vasculature | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.42e-33 | 9 |
upper respiratory tract | 2.80e-16 | 19 |
nucleus pulposus | 1.85e-12 | 3 |
axial mesoderm | 1.85e-12 | 3 |
notochord | 1.85e-12 | 3 |
chordamesoderm | 1.85e-12 | 3 |
respiratory primordium | 1.60e-08 | 38 |
endoderm of foregut | 1.60e-08 | 38 |
intervertebral cartilage | 5.35e-08 | 5 |
symphysis | 5.35e-08 | 5 |
nonsynovial joint | 5.35e-08 | 5 |
fibrous joint | 5.35e-08 | 5 |
cartilaginous joint | 5.35e-08 | 5 |
developing mesenchymal condensation | 5.35e-08 | 5 |
pre-cartilage condensation | 5.35e-08 | 5 |
cartilaginous condensation | 5.35e-08 | 5 |
cartilage element | 5.35e-08 | 5 |
post-cranial axial skeletal system | 5.35e-08 | 5 |
vertebral column | 5.35e-08 | 5 |
intervertebral disk | 5.35e-08 | 5 |
intervertebral joint | 5.35e-08 | 5 |
brain vasculature | 5.73e-08 | 5 |
segment of respiratory tract | 5.10e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 7.67e-18 | 2 |
malignant fibroxanthoma | 7.67e-18 | 2 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |