FFCP PHASE1:Hg19::chr3:197300199..197300219,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=622 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1027 | |||
|TSSclassifier=strong | |||
|UniProt=Q02338,C9JEB9 | |||
|association_with_transcript=-5bp_to_ENST00000358186,ENST00000431056,NM_203315,uc003fxu.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_BDH1_5end | |||
|id=chr3:197300199..197300219,- | |||
|ontology_enrichment_celltype=CL:0000181!6.09e-37!12;CL:0000417!6.09e-37!12;CL:0000668!6.09e-37!12;CL:0000414!6.09e-37!12;CL:0000412!6.09e-37!12;CL:0000182!6.09e-37!12;CL:0000223!2.42e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.07e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-66,12;CL:0000223,1.31e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.41e-53;11!UBERON:0009497;4.99e-45;13!UBERON:0001041;1.64e-19;30!UBERON:0003104;6.17e-19;31!CL:0000223;2.93e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.21e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!6.56e-36!19;UBERON:0006925!6.56e-36!19;UBERON:0008836!6.56e-36!19;UBERON:0005057!5.13e-31!26;UBERON:0008835!8.71e-31!22;UBERON:0003894!8.71e-31!22;UBERON:0009854!2.25e-29!23;UBERON:0007499!6.85e-27!25;UBERON:0009497!6.85e-27!25;UBERON:0000015!6.85e-27!25;UBERON:0002423!6.85e-27!25;UBERON:0006235!6.85e-27!25;UBERON:0004161!6.85e-27!25;UBERON:0009856!8.61e-26!26;UBERON:0002365!2.34e-21!31;UBERON:0002330!2.34e-21!31;UBERON:0002368!1.01e-18!35;UBERON:0005172!3.03e-16!55;UBERON:0005173!3.03e-16!55;UBERON:0002417!1.99e-14!61;UBERON:0000916!1.99e-14!61;UBERON:0000949!3.52e-14!45;UBERON:0003929!5.46e-14!54;UBERON:0002530!2.09e-10!59;UBERON:0005911!1.54e-08!82;UBERON:0002146!4.11e-08!1;UBERON:0005623!4.11e-08!1;UBERON:0002902!6.24e-08!1;UBERON:0009899!6.24e-08!1;UBERON:0005177!2.79e-07!107;UBERON:0000466!5.72e-07!126;UBERON:0001041!8.60e-07!98;UBERON:0009569!8.84e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.08e-69;19!UBERON:0006925;2.08e-69;19!UBERON:0002423;1.15e-52;25!UBERON:0002365;4.35e-41;31!UBERON:0002330;4.35e-41;31!UBERON:0002368;5.03e-36;33!UBERON:0000949;8.88e-26;43!UBERON:0005172;1.02e-15;52!UBERON:0005173;1.02e-15;52!UBERON:0002417;1.50e-14;58!UBERON:0000916;1.50e-14;58!UBERON:0002530;8.21e-13;57!UBERON:0001007;1.42e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.08e-69,19;UBERON:0006925,2.08e-69,19;UBERON:0008836,2.08e-69,19;UBERON:0008835,6.74e-60,22;UBERON:0003894,6.74e-60,22;UBERON:0009854,2.81e-57,23;UBERON:0007499,1.15e-52,25;UBERON:0009497,1.15e-52,25;UBERON:0000015,1.15e-52,25;UBERON:0002423,1.15e-52,25;UBERON:0006235,1.15e-52,25;UBERON:0004161,1.15e-52,25;UBERON:0009856,1.26e-50,26;UBERON:0002365,2.15e-42,31;UBERON:0002330,2.15e-42,31;UBERON:0002368,1.69e-37,35;UBERON:0000949,4.67e-29,45;UBERON:0003929,3.99e-24,54;UBERON:0005172,3.99e-24,54;UBERON:0005173,3.99e-24,54;UBERON:0002530,4.94e-22,59;UBERON:0002417,1.18e-21,60;UBERON:0000916,1.18e-21,60;UBERON:0005911,1.11e-15,82;UBERON:0001041,9.69e-15,87;UBERON:0005177,1.33e-12,101;UBERON:0009569,2.71e-11,112;UBERON:0003914,8.86e-11,117;UBERON:0004921,1.38e-10,118;UBERON:0005256,2.63e-10,122;UBERON:0001007,1.75e-08,145;UBERON:0001555,1.75e-08,145;UBERON:0007026,1.75e-08,145;UBERON:0000490,2.33e-08,148;UBERON:0001048,1.14e-07,160;UBERON:0003104,1.14e-07,160;UBERON:0009142,1.14e-07,160;UBERON:0004119,1.28e-07,160;UBERON:0000925,1.28e-07,160;UBERON:0006595,1.28e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,207.878257107803,111.059475484572,90.3908557222548,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.5340834079514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.783536559281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,1.16495949527454,4.17550866228285,3.95596120229599,3.77459845583435,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,76.2071615126029,23.8512400041998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@BDH1 | |||
}} |
Revision as of 23:38, 21 January 2014
Short description: | p2@BDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BDH1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000358186, ENST00000431056, NM_203315, uc003fxu.2_5end |
EntrezGene: | BDH1 |
HGNC: | 1027 |
UniProt: | Q02338C9JEB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.07e-66 | 12 |
endodermal cell | 1.31e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.21e-07 | 39 |