FFCP PHASE1:Hg19::chr3:18487033..18487044,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |||
|TSSclassifier=strong | |||
|UniProt=C9JGL9 | |||
|association_with_transcript=35bp_to_ENST00000415069_5end | |||
|coexpression_cluster_id=C712 | |||
|description=CAGE_peak_23_at_SATB1_5end | |||
|id=chr3:18487033..18487044,- | |||
|ontology_enrichment_celltype=CL:0000084!1.47e-31!25;CL:0000827!1.47e-31!25;CL:0000838!7.50e-29!52;CL:0000542!3.87e-28!53;CL:0000051!3.87e-28!53;CL:0000791!1.73e-26!18;CL:0000789!1.73e-26!18;CL:0002420!1.73e-26!18;CL:0002419!1.73e-26!18;CL:0000790!1.73e-26!18;CL:0000625!1.91e-16!11;CL:0000037!2.35e-15!172;CL:0000566!2.35e-15!172;CL:0002087!2.96e-15!119;CL:0000738!2.67e-14!140;CL:0000988!7.79e-14!182;CL:0002031!2.50e-11!124;CL:0002032!3.82e-11!165;CL:0000837!3.82e-11!165;CL:0000624!7.05e-10!6;CL:0000623!1.98e-07!3;CL:0000825!1.98e-07!3;CL:0000842!3.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.83e-35;18!CL:0000789;2.83e-35;18!CL:0002419;2.83e-35;18!CL:0000625;5.83e-30;11!CL:0000084;2.70e-25;25!CL:0000624;9.67e-10;6!CL:0000815;6.57e-08;2!CL:0000792;6.57e-08;2!CL:0002677;6.57e-08;2!CL:0000542;3.44e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.08e-35,18;CL:0000789,2.08e-35,18;CL:0002420,2.08e-35,18;CL:0002419,2.08e-35,18;CL:0000790,2.08e-35,18;CL:0000625,5.84e-30,11;CL:0000084,2.17e-25,25;CL:0000827,2.17e-25,25;CL:0000838,5.86e-12,52;CL:0000542,1.01e-11,53;CL:0000051,1.01e-11,53;CL:0000624,7.42e-10,6;CL:0000815,6.15e-08,2;CL:0000792,6.15e-08,2;CL:0002677,6.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.83e-35;18!CL:0000051;3.44e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.62e-11!7;UBERON:0002370!3.96e-10!4;UBERON:0005058!3.96e-10!4;UBERON:0009113!3.96e-10!4;UBERON:0003295!3.96e-10!4;UBERON:0005562!3.96e-10!4;UBERON:0000178!1.54e-08!15;UBERON:0000179!1.54e-08!15;UBERON:0000463!1.54e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.13e-28;2!UBERON:0005058;3.13e-28;2!UBERON:0009113;3.13e-28;2!UBERON:0004177;6.70e-12;5!UBERON:0005057;6.70e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-14,4;UBERON:0005058,1.23e-14,4;UBERON:0009113,1.23e-14,4;UBERON:0003295,1.23e-14,4;UBERON:0005562,1.23e-14,4;UBERON:0003351,4.54e-10,6;UBERON:0004177,9.33e-09,7;UBERON:0005057,9.33e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,1.12101712596307,0,1.7703879310245,0.393010762749165,0.411202997999018,0.501559486172034,1.30368906653436,1.4203434172042,0,0.111410456885174,0,0,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,1.63115219478266,0.802622484269139,1.04535523804977,0.339928028092699,0.766440987203842,0.68725489096526,0.759059076058509,1.27426165729639,0.651083453856419,0,1.50575119077773,1.27986611154418,0,0.236777252044017,0.821127996921047,1.20964045934839,2.13952156626806,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0.355709216742071,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0.447352215784832,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,1.02314474045374,0,4.7896618469388,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,5.49005733606052,6.33162085817751,0,0,0,0,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p23@SATB1 | |||
}} |
Revision as of 17:47, 21 January 2014
Short description: | p23@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SATB1_5end |
Coexpression cluster: | C712_thymus_biphenotypic_CD4_non_granulocyte_merkel_acute |
Association with transcript: | 35bp_to_ENST00000415069_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9JGL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.08e-35 | 18 |
alpha-beta T cell | 2.08e-35 | 18 |
immature T cell | 2.08e-35 | 18 |
mature T cell | 2.08e-35 | 18 |
immature alpha-beta T cell | 2.08e-35 | 18 |
CD8-positive, alpha-beta T cell | 5.84e-30 | 11 |
T cell | 2.17e-25 | 25 |
pro-T cell | 2.17e-25 | 25 |
lymphoid lineage restricted progenitor cell | 5.86e-12 | 52 |
lymphocyte | 1.01e-11 | 53 |
common lymphoid progenitor | 1.01e-11 | 53 |
CD4-positive, alpha-beta T cell | 7.42e-10 | 6 |
regulatory T cell | 6.15e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.15e-08 | 2 |
naive regulatory T cell | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.23e-14 | 4 |
hemolymphoid system gland | 1.23e-14 | 4 |
thymic region | 1.23e-14 | 4 |
pharyngeal gland | 1.23e-14 | 4 |
thymus primordium | 1.23e-14 | 4 |
pharyngeal epithelium | 4.54e-10 | 6 |
hemopoietic organ | 9.33e-09 | 7 |
immune organ | 9.33e-09 | 7 |