FFCP PHASE1:Hg19::chr3:11034403..11034492,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6529 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11042 | |||
|TSSclassifier=strong | |||
|UniProt=P30531,C9J5P8 | |||
|association_with_transcript=0bp_to_ENST00000287766,ENST00000425938,ENST00000462473,NM_003042,uc010hdq.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SLC6A1_5end | |||
|id=chr3:11034403..11034492,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-16;82!UBERON:0002532;4.05e-07;206!UBERON:0010316;4.05e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.87e-84!115;UBERON:0001017!7.56e-67!82;UBERON:0005743!1.34e-64!86;UBERON:0000073!5.17e-61!94;UBERON:0001016!5.17e-61!94;UBERON:0002616!3.49e-60!59;UBERON:0001049!1.72e-59!57;UBERON:0005068!1.72e-59!57;UBERON:0006241!1.72e-59!57;UBERON:0007135!1.72e-59!57;UBERON:0000955!8.48e-56!69;UBERON:0006238!8.48e-56!69;UBERON:0003075!2.44e-47!86;UBERON:0007284!2.44e-47!86;UBERON:0003080!1.14e-45!42;UBERON:0002780!4.68e-45!41;UBERON:0001890!4.68e-45!41;UBERON:0006240!4.68e-45!41;UBERON:0002346!3.80e-44!90;UBERON:0001893!5.08e-38!34;UBERON:0002020!8.01e-38!34;UBERON:0003528!8.01e-38!34;UBERON:0002791!9.69e-37!33;UBERON:0001869!1.09e-35!32;UBERON:0004121!7.69e-35!169;UBERON:0000153!7.32e-34!129;UBERON:0007811!7.32e-34!129;UBERON:0003056!2.05e-33!61;UBERON:0000924!2.42e-33!173;UBERON:0006601!2.42e-33!173;UBERON:0000033!6.80e-32!123;UBERON:0002619!1.43e-27!22;UBERON:0000956!2.40e-27!25;UBERON:0000203!2.40e-27!25;UBERON:0001950!2.20e-25!20;UBERON:0000025!1.99e-18!194;UBERON:0000477!3.34e-17!286;UBERON:0004111!3.08e-16!241;UBERON:0003076!2.03e-14!15;UBERON:0003057!2.03e-14!15;UBERON:0000475!4.18e-14!365;UBERON:0000119!6.43e-14!312;UBERON:0000481!2.07e-13!347;UBERON:0000483!7.94e-13!309;UBERON:0004732!2.43e-12!13;UBERON:0000062!5.11e-12!511;UBERON:0002420!7.15e-12!9;UBERON:0007245!7.15e-12!9;UBERON:0010009!7.15e-12!9;UBERON:0010011!7.15e-12!9;UBERON:0000454!7.15e-12!9;UBERON:0002308!7.80e-12!9;UBERON:0000125!7.80e-12!9;UBERON:0000064!3.85e-11!219;UBERON:0004733!3.93e-11!12;UBERON:0002028!3.93e-11!12;UBERON:0007277!3.93e-11!12;UBERON:0000922!4.76e-11!612;UBERON:0000468!1.74e-10!659;UBERON:0001871!2.93e-10!7;UBERON:0002298!9.46e-10!8;UBERON:0009663!1.34e-09!7;UBERON:0002050!1.55e-09!605;UBERON:0005423!1.55e-09!605;UBERON:0000467!1.95e-09!625;UBERON:0000480!2.37e-09!626;UBERON:0000923!3.77e-09!604;UBERON:0005291!3.77e-09!604;UBERON:0006598!3.77e-09!604;UBERON:0002532!3.77e-09!604;UBERON:0000200!1.38e-08!6;UBERON:0001894!2.57e-08!7;UBERON:0006222!2.57e-08!7;UBERON:0002680!5.30e-08!9;UBERON:0001895!5.30e-08!9;UBERON:0010092!5.30e-08!9;UBERON:0002021!2.07e-07!5;UBERON:0001872!2.54e-07!5;UBERON:0000349!2.81e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.83e-40;34!UBERON:0003528;4.05e-40;34!UBERON:0002020;4.05e-40;34!UBERON:0001869;5.58e-40;32!UBERON:0002791;8.42e-40;32!UBERON:0002780;1.23e-38;41!UBERON:0001890;1.23e-38;41!UBERON:0000073;1.86e-37;53!UBERON:0002616;1.86e-37;53!UBERON:0002619;3.44e-36;22!UBERON:0000956;1.50e-33;25!UBERON:0000203;1.50e-33;25!UBERON:0001950;2.82e-33;20!UBERON:0001017;9.70e-30;75!UBERON:0000955;8.53e-28;68!UBERON:0001016;4.14e-24;83!UBERON:0007023;1.36e-20;114!UBERON:0002420;2.93e-15;9!UBERON:0007245;2.93e-15;9!UBERON:0010009;2.93e-15;9!UBERON:0010011;2.93e-15;9!UBERON:0000454;2.93e-15;9!UBERON:0000125;3.24e-15;9!UBERON:0002308;3.24e-15;9!UBERON:0004732;4.19e-14;13!UBERON:0004733;1.56e-12;12!UBERON:0002028;1.56e-12;12!UBERON:0009663;3.01e-12;7!UBERON:0001871;1.14e-11;6!UBERON:0011216;6.38e-11;132!UBERON:0000200;6.65e-11;6!UBERON:0002298;2.53e-10;6!UBERON:0002021;2.41e-09;5!UBERON:0001872;3.17e-09;5!UBERON:0000349;3.72e-09;5!UBERON:0002680;1.73e-08;9!UBERON:0001895;1.73e-08;9!UBERON:0000922;2.34e-08;49!UBERON:0001894;2.76e-08;7!UBERON:0000369;6.68e-08;4!UBERON:0002435;6.68e-08;4!UBERON:0000204;6.68e-08;4!UBERON:0002784;4.43e-07;4!UBERON:0005284;5.98e-07;5!UBERON:0010314;7.63e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,1.56727360739044,1.71741592278634,0,0.753255837568817,0,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,39.8176389513046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02194366518136,3.45705554687999,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,65.912618107352,38.3302614504274,41.9460833743797,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,1.34557301214433,6.10344096366592,0.1466765716419,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40150109623115,11.712586847186,4.63973287666617,12.7312361654105,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,34.6568048709051,113.923616705204,0,0,0,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,72.9530362465874,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,2.232950216158,4.11293252134344,1.14378116354295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,78.2334984455035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,115.321127140891,112.957541377642,0,0,0,4.38345574152353,0.828851746593443,0,0,0,0,0,0,0,1.28236427328014,0,0,251.057181238662,160.767114114488,93.8184850605613,0,0,0.724999575434793,0,0,0,0,0,0,122.23231124231,114.687213132763,112.910484874642,65.462921879285,133.587523767003,218.727240962511,0,0,3.23191085715948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,2.4441205797345,0,0,0,155.764018318345,4.81546588379273,159.299823093231,0,0,0,1.97292201424695,2.41981432097328,72.2331717447957,23.694967360683,0,0.103688191397247,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,9.79589066533036,0,35.4789763025436,0,0,185.88049692646,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,124.286999762926,83.9229972607917,0,0,0,6.98206003180636,5.72901060029209,2.15361907373044,0.599037001496973,1.28767814440971,1.56220020209311,3.96382487671685,0.360299883542404,0,0,0,0,0.0984274815147488,0,102.5846299854,105.966249954806,0.321506296930038,0.275078873194468,0,0,0,184.739401797053,0,0.551639951094387,1.99327434912993,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0,60.0864158080138,42.4022044519108,146.089740688552,79.2073284438713,0,0,1.06787412567695,6.75978511928564,0.414239055347196,0.496166021811951,0,0,0,0,0.7520696820681,0,0,0,113.416727035774,112.630242504512,108.916109714655,63.6484207215979,68.6650829013116,132.948398697502,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,108.532872379109,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,166.803297575505,123.276021403259,109.189559595091,194.040080571754,56.7161316498866,242.465327139548,162.121548214378,207.015659375774,0,0,0,0,0,0,0,2.93320280562103,0.40341013740704,1.56302802246618,0,0,0,187.349259731427,107.788777608711,113.057677686148,180.417980001665,56.8853801378948,0.548257766857182,4.46590060550365,0,0,12.8568440610789,9.07966049990825,6.06965604236632,0.682986574053893,0.177404740325278,0,0,105.285116381112,207.447327817226,0,0,1.64835494986079,125.535356342886,0,2.73947616152849,0,0,16.5825582489843,0.47404083519818,0,0,0,0,0,0,0,0,0,5.08064460229115,0,0,0,0,0,0,0.647428837187895,0.718639647993729,1.1598144313382,1.45713297917742,0,0,0.118920090777569,0,0,0,0.154348316215889,1.09279780251979,0,1.96118657403124,0,106.988114577645,62.3797440686881,208.369273698616,0,1.31577485171795,7.54157289290853,0,0,0,0,1.46067277649303,0.458729283404541,82.8502790615389,0,211.11357704279,67.6343570027585,1.5870805215462,0,0,0,0,0,0,0,0,0,0,1.89446745545599,3.21556956187414,139.300465829075,92.0553663170868,2.98527574661373,0.476128862927481,6.91101335245265,12.9736152878343,0,0.25458863311266,1.41482032270754,4.78976845373315,2.05339980651169,2.55937801455433,0.932388670104793,2.66128285236811,0,0,0,0,2.34640942403454,2.32258743947446,6.10344267473608,1.99727032255654,8.4534993308231,0 | |||
|short_description=p1@SLC6A1 | |||
}} |
Revision as of 17:21, 21 January 2014
Short description: | p1@SLC6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000287766, ENST00000425938, ENST00000462473, NM_003042, uc010hdq.2_5end |
EntrezGene: | SLC6A1 |
HGNC: | 11042 |
UniProt: | P30531C9J5P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data