FFCP PHASE1:Hg19::chr22:33256291..33256330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENST00000327661_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_ENST00000327661_5end | |||
|id=chr22:33256291..33256330,- | |||
|ontology_enrichment_celltype=CL:0000055!4.27e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.32e-12;12!CL:0000349;1.74e-10;19!CL:0000149;1.64e-08;4!CL:0002541;1.19e-07;3!CL:0002579;5.57e-07;3!CL:0002586;7.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.87e-12,12;CL:0000349,1.16e-10,19;CL:0000149,1.70e-08,4;CL:0002541,1.14e-07,3;CL:0002579,5.58e-07,3;CL:0002586,9.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.44e-14!57;UBERON:0005631!5.46e-09!14;UBERON:0000158!5.46e-09!14;UBERON:0003124!4.80e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.42e-11;24!UBERON:0004457;2.81e-10;9!UBERON:0000042;2.81e-10;9!UBERON:0005631;2.07e-09;10!UBERON:0000158;2.07e-09;10!UBERON:0003688;1.87e-08;6!UBERON:0002358;1.87e-08;6!UBERON:0003684;1.87e-08;6!UBERON:0001178;1.87e-08;6!UBERON:0001987;6.04e-08;4!UBERON:0003124;1.19e-07;3!UBERON:0000920;1.19e-07;3!UBERON:0000966;5.99e-07;5!UBERON:0005388;5.99e-07;5!UBERON:0001802;5.99e-07;5!UBERON:0001781;7.94e-07;3!UBERON:0001782;7.94e-07;3!UBERON:0003513;9.14e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.34e-15,14;UBERON:0000158,1.34e-15,14;UBERON:0003124,4.47e-14,7;UBERON:0004923,3.72e-13,66;UBERON:0000478,1.68e-11,24;UBERON:0004457,2.01e-09,12;UBERON:0000042,2.01e-09,12;UBERON:0003688,1.43e-08,6;UBERON:0002358,1.43e-08,6;UBERON:0003684,1.43e-08,6;UBERON:0001178,1.43e-08,6;UBERON:0001987,4.14e-08,4;UBERON:0004340,4.14e-08,4;UBERON:0000920,1.14e-07,3;UBERON:0002199,2.29e-07,46;UBERON:0002416,2.29e-07,46;UBERON:0003513,8.56e-07,7;UBERON:0001782,9.11e-07,3;UBERON:0005424,9.11e-07,3 | |||
|phase1_expression=2.36181893051724,0.642301571672949,0.845726424575827,5.00366491765652,1.78784437770915,4.36169262050184,0,1.89515962028049,0,0.245733936501509,0,1.74753097704138,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,0.50133791063589,0.434539556882471,0,1.45990461090791,0.189069634328136,0.665188192387692,0.263504357079378,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,5.4666914686485,0.886413581652058,0.794455084879313,1.72101972449288,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0.919463387397059,0,0,1.25572744982203,1.2813443329114,2.54318281391474,3.60109315301283,0.412210116953756,2.31876486041066,2.60563598864226,2.86919764810153,0.68205903612839,2.01947019395292,1.01254888506529,0.969876340912871,1.06502877754984,0.604512589365842,0.847802961552438,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,2.93227474779292,0,0,0,0,0.866198686566443,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.806026704325635,0.290633938513962,0.766765358330422,0,0.176096868026452,0,0.432359860250884,0.12624243342638,0.253991577168676,0.381988425558278,0,1.71072446022705,0.719792448923265,2.70308752059526,0,0.784917590417525,0,1.54010400223995,3.10252117818667,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,0,0.428933980974443,0,0.823240336780769,2.28015329005615,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0.831883446123229,1.24900292158013,2.36553622550902,0.35142424497814,1.80567659836631,0,0,0,0.553107505625109,1.47702144595741,1.37060810223918,0.343143423810856,0,0,0,1.5156378572313,1.66435439510497,2.72151263996712,3.72161711728165,1.07423381301644,0.561320188866147,2.56278298511402,6.65219423786715,2.41280881715411,0,1.85051632563187,3.9063579568888,1.97105174433142,0,4.29978400301849,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,2.3080511260475,2.62411716559765,3.57916234130733,1.23649213977267,0,0,0,0,0,1.06337790121334,0.462145851343933,0,0.413509717453592,0.107420244868274,0,0.170453254832202,0.445160178233687,0.165284915360978,0.192190067365106,0,0,0,3.77774816196768,0,1.84820148105653,0.532306030317022,0,0.74129687641568,0,0,0.316379424718726,0.953150969619124,1.27948895655667,2.1396949401696,0,0.78494864019923,0.179872457583315,0.274537029736055,0,1.2130948894399,1.58510321173008,0,0,2.92456187557541,10.5650146756755,0,0.282810863907425,1.13008116620243,1.65409603063837,0,2.19225442626881,1.15755106853338,1.31178950409327,0.405820753925408,0.30982349809975,0,0.286822704408103,0.687743287091848,0,0,2.9555068941673,2.63435914367922,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,1.60044461320525,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,5.49112314896687,1.48482340416319,3.68592842519078,0.994147647766298,0,0,0,0,0.796991953004279,0,0,1.63629892003448,0,7.77598969154519,0,0,0,0.887790650732402,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0.341380344856499,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0.557694977114413,0.769502585037971,0.341826167541004,0.23056390438806,0,0.325942115766024,14.0360510282045,5.49585560411174,21.3213910407454,0,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0.424059214301822,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,1.45329133145522,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0.0821154570532092,0.484945082442097,0,1.80784592624426,0,0,0,0.195551382734803,0,0.640358984218058,0.799238438328521,0,0,0,0,0,0.707082103850386,0,0,1.73396969981747,0.288950589901519,0.600420288709789,0,0,0,0,3.90995361781156,0.916641696046735,0,0.798716001995964,0.429226048136571,0,0.604651252380536,0,0,0.157566364614447,0.164831716762333,0.404421263125109,0,0.508039992394707,0,0,0,0,0,0,0,0.121499113316049,1.0063040627978,1.02447419488958,0.944182586429966,0,0,0,1.42939065274673,0,0,0,1.72844298240254,0,0,0.082092520749339,0,0.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| |||
|short_description=p1@ENST00000327661 | |||
}} |
Revision as of 15:30, 21 January 2014
Short description: | p1@ENST00000327661 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_1_at_ENST00000327661_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 89bp_to_ENST00000327661_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.87e-12 | 12 |
extraembryonic cell | 1.16e-10 | 19 |
visual pigment cell | 1.70e-08 | 4 |
chorionic membrane mesenchymal stem cell | 1.14e-07 | 3 |
omentum preadipocyte | 5.58e-07 | 3 |
retinal pigment epithelial cell | 9.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.34e-15 | 14 |
membranous layer | 1.34e-15 | 14 |
chorion | 4.47e-14 | 7 |
organ component layer | 3.72e-13 | 66 |
extraembryonic structure | 1.68e-11 | 24 |
cavity lining | 2.01e-09 | 12 |
serous membrane | 2.01e-09 | 12 |
omentum | 1.43e-08 | 6 |
peritoneum | 1.43e-08 | 6 |
abdominal cavity | 1.43e-08 | 6 |
visceral peritoneum | 1.43e-08 | 6 |
placenta | 4.14e-08 | 4 |
allantois | 4.14e-08 | 4 |
egg chorion | 1.14e-07 | 3 |
integument | 2.29e-07 | 46 |
integumental system | 2.29e-07 | 46 |
trunk blood vessel | 8.56e-07 | 7 |
pigmented layer of retina | 9.11e-07 | 3 |
presumptive retinal pigmented epithelium | 9.11e-07 | 3 |