FFCP PHASE1:Hg19::chr20:25388389..25388400,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28980 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=22bp_to_ENST00000484893_5end | |||
|description=CAGE_peak_2_at_GINS1_5end | |||
|id=chr20:25388389..25388400,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.79e-18!254;CL:0002319!6.42e-09!25;CL:0000548!2.65e-08!679;CL:0000004!2.65e-08!679;CL:0000255!2.65e-08!679;CL:0000012!4.03e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.73e-11;25!CL:0002322;5.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.40e-13,253;CL:0002319,1.01e-11,25;CL:0000047,1.89e-07,8;CL:0002322,6.56e-07,5;CL:0000133,7.41e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.84e-39!235;DOID:14566!6.97e-37!239;DOID:0050687!4.18e-26!143;DOID:305!1.78e-24!106;DOID:0050686!1.08e-15!137;DOID:2531!9.63e-09!51;DOID:0060083!9.63e-09!51;DOID:7!1.57e-08!39;DOID:1240!2.64e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:305;5.67e-08;106!DOID:7;1.95e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.08e-32,235;DOID:14566,2.97e-31,239;DOID:305,2.88e-22,106;DOID:0050687,5.79e-22,143;DOID:0050686,9.27e-12,137;DOID:7,2.76e-09,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.60e-10;9!UBERON:0001557;6.60e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.99e-10,9 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0.527533956456907,0.37129905888014,0,0,0,0,0,1.23121058076788,0.612002073732759,0.626909442956176,1.43117993565528,1.23186982565596,1.38096903554283,0.534893840235659,0.738905305049512,0.865818594450472,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0.92960640696362,0.710846162437108,0.587200878669695,0,0.200544447470142,0.217010870715852,1.11957737119962,2.26725566213286,1.80302897343931,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0.393010762749165,0,0,0,0,0,0.445641827540694,0,0,0,0.128091319725675,0,0.328875809207352,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.756278537312543,0.665188192387692,0.43917392846563,0.392937226493138,0.364295288292542,0.370784442784429,0.97364218096405,0.522389211897802,0.664789802594326,0,0.571994910780128,0.371457501329565,0.39752481473341,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.835979866147242,1.03366703667732,0.35576626268671,1.00416183829401,1.61131726843659,0,0.488124115096339,1.10298924103761,0.81014194788176,1.42879565254528,0.673588117878509,0.788280363383256,0,1.89853131913626,1.28241220751285,0,0,0.436094052142534,0,0.506522046658319,0,0.286836620748814,0.709336764396714,1.12135520028461,1.06748995729705,0,0.622422070799533,0,0.490385709340376,0.302714855289863,0.576175924479999,0.234321431833797,0,1.1409436430889,0.298897361103602,0.23486899728753,0.485618833104395,0.561803226808994,0.204154171254893,0.245668634623536,0.103325781175765,0,0,1.82032272387605,0,1.0100166837244,0.375355559615893,1.10825646193673,0.438977620880838,0,0,0.567160915800105,0.717558542755448,0,0.211931901159562,2.10063767259082,0.412210116953756,0,0.37223371266318,0.843881661206331,0.292311015483596,0.504867548488229,0.276149695926898,0.484938170456436,1.06502877754984,0.302256294682921,1.52604533079439,0.57978255948989,0.818238361772504,1.14721838155602,3.65921118388786,5.96383957446684,3.36962434321603,2.28054321033815,3.02785021050754,7.2995471815166,0,0,0,0,0,1.8929088006375,3.87744787179634,3.37415441836875,3.08823123650703,3.4860711054785,2.60997681022206,3.23595139584395,2.15843611637881,1.92373578473195,1.4763109092493,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0.590789906681404,4.85609409356116,3.56666471775029,0.343135620597051,0.109750285408626,0,0.402115889646523,0.370353780634118,0,0,0,0.34779121492523,0.234817388471643,0.577465791044295,0,0.761016608938393,3.1608175918371,8.58486162094873,0.492434012174795,1.17002132569619,1.18904929830983,0,0.671928512795438,0.425325291727159,0.626909658919938,0.581267877027924,0,0,0,0,0.144119953416961,0.12624243342638,1.07946420296687,0,1.17217447210047,0,0.822619941626588,0.600686115687835,1.14330573052231,1.45770409648969,0,1.68678057388185,0,0,0.845302752556,0,1.04007436911366,0.257207374262142,4.25547396069835,0,0.142977993658148,0,0,1.30294473717494,0,0.791951872933429,0,0,0.199945982364114,0,2.00902836572851,2.10833939483032,0.718874566474748,0,0,0.723906533337896,0,0.716243852959582,0.560425719967636,0.197030760201927,0,0.128343036279748,3.04913549066956,2.60279707715243,2.31986643833309,0.335032530668698,1.91381625495949,0,0,0,0,0.500170521059677,0,0.623912584592421,0.535286966391485,0.157702415033935,0,0,0,1.03473071292505,2.65690239414175,0.921845842708516,0.347534457872331,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0.482561763430822,1.48418066444991,0.771048469013278,0.355123450626254,0.574890092096664,0,0.464841513839837,4.47179963489002,0,0,0.803701137152247,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,1.13733384070897,1.36074964221213,1.0795795805107,0,1.08378575017541,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0.219259876645935,0,0,0.656029291399411,0,0,3.11336180382368,4.86806049531469,0.574265537996172,0.650060246036521,0,0.096670718292122,0.616194468458578,0.307007349452259,0.689182862422653,0.322260734604821,0.290033387828457,0.767039646744908,0.534192213880424,0.165284915360978,0.192190067365106,0.510450849978337,0.2023155617111,0,0.31481234683064,0,0.924100740528266,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0.471249609382746,0,0,0.421258456238981,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0.354761064070598,0.211107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| |||
|short_description=p2@GINS1 | |||
}} |
Revision as of 10:38, 21 January 2014
Short description: | p2@GINS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GINS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000484893_5end |
EntrezGene: | GINS1 |
HGNC: | 28980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.40e-13 | 253 |
neural cell | 1.01e-11 | 25 |
neuronal stem cell | 1.89e-07 | 8 |
embryonic stem cell | 6.56e-07 | 5 |
neurectodermal cell | 7.41e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.99e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.08e-32 | 235 |
disease of cellular proliferation | 2.97e-31 | 239 |
carcinoma | 2.88e-22 | 106 |
cell type cancer | 5.79e-22 | 143 |
organ system cancer | 9.27e-12 | 137 |
disease of anatomical entity | 2.76e-09 | 39 |