FFCP PHASE1:Hg19::chr20:18125679..18125686,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57325 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15904 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_ENST00000489634,NR_028402,uc002wqk.2_5end | |||
|coexpression_cluster_id=C1004 | |||
|description=CAGE_peak_7_at_CSRP2BP_5end | |||
|id=chr20:18125679..18125686,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.09e-22!3;CL:0000349!1.82e-22!3;CL:0002577!1.82e-22!3;CL:0002536!4.61e-15!2;CL:0000039!4.33e-10!7;CL:0000586!4.33e-10!7;CL:0002563!1.84e-08!4;CL:0000313!3.28e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;9.22e-26;4!CL:0002253;6.43e-14;2!CL:0002541;1.19e-09;3!CL:0002231;1.19e-09;3!CL:0002577;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.82e-26,4;CL:0002253,6.43e-14,2;CL:0002541,1.10e-09,3;CL:0002231,1.19e-09,3;CL:0002577,1.41e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!8.15e-09!1;DOID:326!8.15e-09!1;DOID:3978!8.15e-09!1;DOID:3394!8.15e-09!1;DOID:5844!8.15e-09!1;DOID:2152!3.28e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:178;8.64e-26;1!DOID:326;8.64e-26;1!DOID:3978;8.64e-26;1!DOID:3394;8.64e-26;1!DOID:5844;8.64e-26;1!DOID:114;1.29e-13;2!DOID:3119;4.41e-08;14!DOID:1287;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.62e-26,1;DOID:326,7.62e-26,1;DOID:3978,7.62e-26,1;DOID:3394,7.62e-26,1;DOID:5844,7.62e-26,1;DOID:114,1.21e-13,2;DOID:3119,4.66e-08,14;DOID:1287,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.03e-60!14;UBERON:0000158!5.03e-60!14;UBERON:0003124!4.61e-50!7;UBERON:0000478!2.96e-34!24;UBERON:0001987!3.61e-29!4;UBERON:0004340!3.61e-29!4;UBERON:0000476!1.09e-22!3;UBERON:0000920!1.09e-22!3;UBERON:0004923!5.40e-19!57;UBERON:0000305!2.24e-16!7;UBERON:0004871!2.34e-14!8;UBERON:0001242!1.84e-08!4;UBERON:0001262!1.84e-08!4;UBERON:0004786!1.84e-08!4;UBERON:0004808!1.84e-08!4;UBERON:0001277!1.84e-08!4;UBERON:0001052!1.91e-08!4;UBERON:0000995!2.35e-08!21;UBERON:0004911!3.28e-08!1;UBERON:0005795!5.77e-08!22;UBERON:0003975!5.77e-08!22;UBERON:0003100!1.23e-07!41;UBERON:0004175!5.54e-07!25;UBERON:0003350!6.30e-07!5;UBERON:0004907!6.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;9.22e-26;4!UBERON:0001242;9.22e-26;4!UBERON:0001262;9.22e-26;4!UBERON:0004786;9.22e-26;4!UBERON:0004808;9.22e-26;4!UBERON:0001277;9.22e-26;4!UBERON:0004907;7.73e-21;5!UBERON:0000485;3.41e-15;7!UBERON:0003929;3.41e-15;7!UBERON:0003350;2.00e-13;8!UBERON:0000160;4.45e-13;17!UBERON:0005409;2.19e-10;22!UBERON:0000059;4.94e-10;11!UBERON:0003124;1.19e-09;3!UBERON:0000920;1.19e-09;3!UBERON:0001987;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.82e-26,4;UBERON:0001262,9.82e-26,4;UBERON:0004786,9.82e-26,4;UBERON:0004808,9.82e-26,4;UBERON:0001277,9.82e-26,4;UBERON:0001052,1.11e-25,4;UBERON:0004907,8.98e-21,5;UBERON:0003124,3.29e-15,7;UBERON:0003350,2.07e-13,8;UBERON:0000160,4.83e-13,17;UBERON:0001046,1.84e-12,19;UBERON:0000485,4.94e-12,9;UBERON:0000059,5.29e-10,11;UBERON:0000920,1.10e-09,3;UBERON:0005409,3.07e-09,25;UBERON:0005631,4.34e-08,14;UBERON:0000158,4.34e-08,14;UBERON:0001987,1.69e-07,4;UBERON:0004340,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,2.33369875465408,0.977826347298073,0.638002319463839,0.641183153813036,2.66517388009317,0,0,0,0,0,0,0,0,0,0.816164040795739,3.25112064298064,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@CSRP2BP | |||
}} |
Revision as of 10:23, 21 January 2014
Short description: | p7@CSRP2BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CSRP2BP_5end |
Coexpression cluster: | C1004_chorionic_pancreatic_choriocarcinoma_amniotic_placenta_colon_Placental |
Association with transcript: | -56bp_to_ENST00000489634, NR_028402, uc002wqk.2_5end |
EntrezGene: | CSRP2BP |
HGNC: | 15904 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.82e-26 | 4 |
epithelial cell of large intestine | 6.43e-14 | 2 |
chorionic membrane mesenchymal stem cell | 1.10e-09 | 3 |
epithelial cell of prostate | 1.19e-09 | 3 |
placental epithelial cell | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 9.82e-26 | 4 |
wall of intestine | 9.82e-26 | 4 |
gastrointestinal system mucosa | 9.82e-26 | 4 |
gastrointestinal system epithelium | 9.82e-26 | 4 |
intestinal epithelium | 9.82e-26 | 4 |
rectum | 1.11e-25 | 4 |
lower digestive tract | 8.98e-21 | 5 |
chorion | 3.29e-15 | 7 |
epithelium of mucosa | 2.07e-13 | 8 |
intestine | 4.83e-13 | 17 |
hindgut | 1.84e-12 | 19 |
simple columnar epithelium | 4.94e-12 | 9 |
large intestine | 5.29e-10 | 11 |
egg chorion | 1.10e-09 | 3 |
gastrointestinal system | 3.07e-09 | 25 |
extraembryonic membrane | 4.34e-08 | 14 |
membranous layer | 4.34e-08 | 14 |
placenta | 1.69e-07 | 4 |
allantois | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.62e-26 | 1 |
ischemia | 7.62e-26 | 1 |
extrinsic cardiomyopathy | 7.62e-26 | 1 |
myocardial ischemia | 7.62e-26 | 1 |
myocardial infarction | 7.62e-26 | 1 |
heart disease | 1.21e-13 | 2 |
gastrointestinal system cancer | 4.66e-08 | 14 |
cardiovascular system disease | 1.80e-07 | 4 |