FFCP PHASE1:Hg19::chr20:6103666..6103737,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |||
|association_with_transcript=0bp_to_ENST00000536936_5end | |||
|coexpression_cluster_id=C2625 | |||
|description=CAGE_peak_1_at_FERMT1_5end | |||
|id=chr20:6103666..6103737,- | |||
|ontology_enrichment_celltype=CL:0000066!1.12e-20!254;CL:0002076!6.90e-17!43;CL:0000223!1.57e-15!59;CL:0002251!2.22e-11!21;CL:0002368!7.58e-09!13;CL:0002321!5.22e-07!248;CL:0000220!7.60e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.07e-13;42!CL:0002251;6.43e-12;20!CL:0002368;3.04e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.76e-20,253;CL:0002076,3.22e-17,42;CL:0000223,6.64e-16,58;CL:0002251,6.75e-12,20;CL:0002368,3.29e-09,13 | |||
|ontology_enrichment_development_v019=CL:0000223;1.76e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.21e-16!106;DOID:0050687!2.62e-15!143;DOID:1749!4.35e-10!14;DOID:14566!3.20e-09!239;DOID:162!6.31e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.46e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.41e-16,106;DOID:0050687,2.02e-14,143;DOID:1749,1.64e-10,14;DOID:14566,4.38e-09,239;DOID:162,8.79e-09,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.94e-27!169;UBERON:0000925!4.94e-27!169;UBERON:0006595!4.94e-27!169;UBERON:0001007!4.22e-23!155;UBERON:0001555!4.22e-23!155;UBERON:0007026!4.22e-23!155;UBERON:0000481!1.99e-19!347;UBERON:0004921!1.99e-18!129;UBERON:0004185!1.99e-18!129;UBERON:0000077!2.14e-16!130;UBERON:0003104!1.03e-15!238;UBERON:0009142!1.03e-15!238;UBERON:0001004!3.65e-14!72;UBERON:0000475!4.95e-13!365;UBERON:0001041!3.46e-11!98;UBERON:0000065!9.40e-11!53;UBERON:0000072!7.08e-10!46;UBERON:0000922!1.30e-09!612;UBERON:0000064!1.32e-09!219;UBERON:0000160!3.27e-09!27;UBERON:0002050!5.02e-09!605;UBERON:0005423!5.02e-09!605;UBERON:0002100!6.12e-09!216;UBERON:0008947!6.16e-09!38;UBERON:0003258!6.16e-09!38;UBERON:0000923!8.03e-09!604;UBERON:0005291!8.03e-09!604;UBERON:0006598!8.03e-09!604;UBERON:0002532!8.03e-09!604;UBERON:0000483!9.84e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0005911!1.10e-08!82;UBERON:0000161!1.21e-08!35;UBERON:0000464!1.44e-08!104;UBERON:0000468!1.56e-08!659;UBERON:0000467!3.15e-08!625;UBERON:0005409!3.16e-08!35;UBERON:0000480!3.27e-08!626;UBERON:0000063!7.73e-08!97;UBERON:0000466!1.21e-07!126;UBERON:0003102!1.26e-07!95;UBERON:0005153!5.43e-07!37;UBERON:0000344!9.19e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;5.69e-08;37!UBERON:0004921;5.70e-08;33!UBERON:0000065;9.17e-08;44!UBERON:0000344;1.57e-07;20!UBERON:0001004;2.32e-07;65!UBERON:0005911;3.59e-07;36!UBERON:0001555;8.83e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.47e-22,160;UBERON:0000925,1.47e-22,160;UBERON:0006595,1.47e-22,160;UBERON:0001007,4.07e-19,145;UBERON:0001555,4.07e-19,145;UBERON:0007026,4.07e-19,145;UBERON:0004921,6.65e-15,118;UBERON:0001004,4.29e-13,74;UBERON:0000065,3.98e-10,54;UBERON:0000072,1.81e-09,47;UBERON:0005911,1.32e-08,82;UBERON:0000161,1.43e-08,36;UBERON:0008947,1.47e-08,38;UBERON:0003258,1.47e-08,38;UBERON:0011216,2.98e-08,223;UBERON:0003102,5.03e-08,99;UBERON:0001041,6.96e-08,87;UBERON:0000344,2.59e-07,20;UBERON:0000483,3.60e-07,306;UBERON:0000119,3.89e-07,309;UBERON:0005157,9.35e-07,47 | |||
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| |||
|short_description=p1@FERMT1 | |||
}} |
Revision as of 10:10, 21 January 2014
Short description: | p1@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FERMT1_5end |
Coexpression cluster: | C2625_oral_keratoacanthoma_bronchial_Small_ductal_squamous_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.76e-20 | 253 |
endo-epithelial cell | 3.22e-17 | 42 |
endodermal cell | 6.64e-16 | 58 |
epithelial cell of alimentary canal | 6.75e-12 | 20 |
respiratory epithelial cell | 3.29e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.47e-22 | 160 |
endoderm | 1.47e-22 | 160 |
presumptive endoderm | 1.47e-22 | 160 |
digestive system | 4.07e-19 | 145 |
digestive tract | 4.07e-19 | 145 |
primitive gut | 4.07e-19 | 145 |
subdivision of digestive tract | 6.65e-15 | 118 |
respiratory system | 4.29e-13 | 74 |
respiratory tract | 3.98e-10 | 54 |
segment of respiratory tract | 1.81e-09 | 47 |
endo-epithelium | 1.32e-08 | 82 |
orifice | 1.43e-08 | 36 |
respiratory primordium | 1.47e-08 | 38 |
endoderm of foregut | 1.47e-08 | 38 |
organ system subdivision | 2.98e-08 | 223 |
surface structure | 5.03e-08 | 99 |
foregut | 6.96e-08 | 87 |
mucosa | 2.59e-07 | 20 |
epithelium | 3.60e-07 | 306 |
cell layer | 3.89e-07 | 309 |
epithelial fold | 9.35e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.41e-16 | 106 |
cell type cancer | 2.02e-14 | 143 |
squamous cell carcinoma | 1.64e-10 | 14 |
disease of cellular proliferation | 4.38e-09 | 239 |
cancer | 8.79e-09 | 235 |