FFCP PHASE1:Hg19::chr2:219696548..219696558,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9387 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGI9 | |||
|association_with_transcript=-9bp_to_ENST00000233944_5end | |||
|coexpression_cluster_id=C3302 | |||
|description=CAGE_peak_2_at_PRKAG3_5end | |||
|id=chr2:219696548..219696558,- | |||
|ontology_enrichment_celltype=CL:0000188!4.01e-34!9;CL:0000594!3.69e-15!3;CL:0000515!3.23e-11!4;CL:0000680!3.35e-08!57;CL:0000056!3.35e-08!57;CL:0000355!3.35e-08!57;CL:0000135!1.75e-07!3;CL:0000386!1.75e-07!3;CL:0000388!1.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.27e-27;9!CL:0002575;4.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.98e-27,9;CL:0002575,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.47e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.89e-15!61;UBERON:0002036!6.89e-15!61;UBERON:0003082!6.89e-15!61;UBERON:0002385!2.61e-14!63;UBERON:0001015!2.61e-14!63;UBERON:0000383!2.61e-14!63;UBERON:0004290!1.51e-12!70;UBERON:0000486!8.66e-12!82;UBERON:0000914!1.48e-11!83;UBERON:0002329!1.48e-11!83;UBERON:0003077!1.48e-11!83;UBERON:0003059!1.48e-11!83;UBERON:0007282!1.48e-11!83;UBERON:0009618!1.48e-11!83;UBERON:0007285!1.48e-11!83;UBERON:0001630!2.86e-11!2;UBERON:0005090!2.86e-11!2;UBERON:0000341!3.50e-11!2;UBERON:0005256!4.39e-08!143;UBERON:0002204!4.97e-08!167;UBERON:0003104!5.85e-08!238;UBERON:0009142!5.85e-08!238;UBERON:0000043!1.75e-07!3;UBERON:0001723!2.06e-07!3;UBERON:0001033!2.06e-07!3;UBERON:0010056!2.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.23e-60;16!UBERON:0002036;4.23e-60;16!UBERON:0005090;2.54e-31;2!UBERON:0001630;2.54e-31;2!UBERON:0002385;2.15e-30;31!UBERON:0001015;2.15e-30;31!UBERON:0000383;2.15e-30;31!UBERON:0000989;6.47e-17;1!UBERON:0008811;6.47e-17;1!UBERON:0001389;8.85e-17;1!UBERON:0000026;8.85e-17;1!UBERON:0008784;8.85e-17;1!UBERON:0006058;8.85e-17;1!UBERON:0003663;8.85e-17;1!UBERON:0004256;8.85e-17;1!UBERON:0004708;8.85e-17;1!UBERON:0002101;8.85e-17;1!UBERON:0004709;8.85e-17;1!UBERON:0002529;8.85e-17;1!UBERON:0010538;8.85e-17;1!UBERON:0003661;8.85e-17;1!UBERON:0010890;8.85e-17;1!UBERON:0002471;8.85e-17;1!UBERON:0001383;8.85e-17;1!UBERON:0010758;8.85e-17;1!UBERON:0010707;8.85e-17;1!UBERON:0000978;8.85e-17;1!UBERON:0002103;8.85e-17;1!UBERON:0001665;8.85e-17;1!UBERON:0003823;8.85e-17;1!UBERON:0000154;8.85e-17;1!UBERON:0010709;8.85e-17;1!UBERON:0002426;2.25e-16;1!UBERON:0003831;2.25e-16;1!UBERON:0003898;2.25e-16;1!UBERON:0004830;2.25e-16;1!UBERON:0003830;2.25e-16;1!UBERON:0005175;2.25e-16;1!UBERON:0001774;2.25e-16;1!UBERON:0001103;2.25e-16;1!UBERON:0000341;5.49e-09;2!UBERON:0002204;1.42e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.54e-31,2;UBERON:0001630,2.54e-31,2;UBERON:0000989,6.47e-17,1;UBERON:0008811,6.47e-17,1;UBERON:0006258,6.47e-17,1;UBERON:0005876,6.47e-17,1;UBERON:0004874,6.47e-17,1;UBERON:0005418,8.86e-17,1;UBERON:0001389,8.86e-17,1;UBERON:0000026,8.86e-17,1;UBERON:0008784,8.86e-17,1;UBERON:0006058,8.86e-17,1;UBERON:0003663,8.86e-17,1;UBERON:0004256,8.86e-17,1;UBERON:0004708,8.86e-17,1;UBERON:0002101,8.86e-17,1;UBERON:0004709,8.86e-17,1;UBERON:0002529,8.86e-17,1;UBERON:0010538,8.86e-17,1;UBERON:0003661,8.86e-17,1;UBERON:0010890,8.86e-17,1;UBERON:0002471,8.86e-17,1;UBERON:0001383,8.86e-17,1;UBERON:0004357,8.86e-17,1;UBERON:0004347,8.86e-17,1;UBERON:0005420,8.86e-17,1;UBERON:0005732,8.86e-17,1;UBERON:0010758,8.86e-17,1;UBERON:0010707,8.86e-17,1;UBERON:0000978,8.86e-17,1;UBERON:0002103,8.86e-17,1;UBERON:0001665,8.86e-17,1;UBERON:0003823,8.86e-17,1;UBERON:0000154,8.86e-17,1;UBERON:0010709,8.86e-17,1;UBERON:0005733,8.86e-17,1;UBERON:0005730,8.86e-17,1;UBERON:0002426,2.25e-16,1;UBERON:0003831,2.25e-16,1;UBERON:0003898,2.25e-16,1;UBERON:0004830,2.25e-16,1;UBERON:0003830,2.25e-16,1;UBERON:0005175,2.25e-16,1;UBERON:0001774,2.25e-16,1;UBERON:0001103,2.25e-16,1;UBERON:0010084,2.25e-16,1;UBERON:0001134,3.56e-15,62;UBERON:0002036,3.56e-15,62;UBERON:0003082,3.56e-15,62;UBERON:0002385,1.11e-14,64;UBERON:0001015,1.11e-14,64;UBERON:0000383,1.11e-14,64;UBERON:0002329,3.57e-13,71;UBERON:0003059,3.57e-13,71;UBERON:0007282,3.57e-13,71;UBERON:0004290,3.57e-13,71;UBERON:0009618,3.57e-13,71;UBERON:0003077,5.55e-13,72;UBERON:0007285,5.55e-13,72;UBERON:0007524,8.52e-13,73;UBERON:0007503,6.19e-12,78;UBERON:0005256,1.28e-11,122;UBERON:0000486,3.55e-11,83;UBERON:0000341,5.08e-09,2;UBERON:0003104,1.27e-08,160;UBERON:0009142,1.27e-08,160;UBERON:0000490,1.53e-07,148 | |||
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|short_description=p2@PRKAG3 | |||
}} |
Revision as of 08:42, 21 January 2014
Short description: | p2@PRKAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKAG3_5end |
Coexpression cluster: | C3302_Skeletal_diaphragm_skeletal_penis_throat_tongue_epididymis |
Association with transcript: | -9bp_to_ENST00000233944_5end |
EntrezGene: | PRKAG3 |
HGNC: | 9387 |
UniProt: | Q9UGI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.98e-27 | 9 |
central nervous system pericyte | 4.34e-09 | 2 |