FFCP PHASE1:Hg19::chr2:201284451..201284455,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:201284451..201284455,+ | |||
|id=chr2:201284451..201284455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.17e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.65e-09;1!UBERON:0005754;2.65e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;6.98e-17;2!DOID:3908;2.76e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.33e-16,2;DOID:3908,4.43e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.59e-07!155;UBERON:0001555!5.59e-07!155;UBERON:0007026!5.59e-07!155;UBERON:0001017!7.63e-07!82;UBERON:0000062!7.83e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0009856;1.77e-18;4!UBERON:0004903;6.98e-17;2!UBERON:0002173;6.98e-17;2!UBERON:0002186;6.98e-17;2!UBERON:0004821;1.43e-11;3!UBERON:0007499;1.43e-11;3!UBERON:0003215;1.43e-11;3!UBERON:0010368;1.43e-11;3!UBERON:0009911;1.43e-11;3!UBERON:0002299;1.43e-11;3!UBERON:0006524;1.43e-11;3!UBERON:0008874;1.43e-11;3!UBERON:0002169;1.43e-11;3!UBERON:0004894;1.43e-11;3!UBERON:0001154;2.65e-09;1!UBERON:0000998;2.65e-09;1!UBERON:0001153;2.65e-09;1!UBERON:0006868;2.65e-09;1!UBERON:0009854;2.65e-09;1!UBERON:0000058;1.04e-07;10!UBERON:0004907;2.76e-07;5!UBERON:0000160;2.94e-07;17!UBERON:0000059;4.75e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.33e-16,2;UBERON:0002173,2.33e-16,2;UBERON:0002186,2.33e-16,2;UBERON:0004821,3.17e-11,3;UBERON:0003215,3.17e-11,3;UBERON:0010368,3.17e-11,3;UBERON:0009911,3.17e-11,3;UBERON:0002299,3.17e-11,3;UBERON:0006524,3.17e-11,3;UBERON:0008874,3.17e-11,3;UBERON:0002169,3.17e-11,3;UBERON:0004894,3.17e-11,3;UBERON:0009856,1.71e-10,26;UBERON:0001154,1.84e-09,1;UBERON:0001153,1.84e-09,1;UBERON:0001045,1.84e-09,1;UBERON:0000998,2.35e-09,1;UBERON:0006868,2.35e-09,1;UBERON:0007499,9.87e-08,25;UBERON:0000160,1.77e-07,17;UBERON:0004907,1.83e-07,5;UBERON:0000059,2.95e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.85870796139317,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.328875809207352,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0.506039384039006,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0.973269740605272,0.378139268656271,0,0.527008714158756,0.196468613246569,0.364295288292542,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.794455084879313,1.43418310374407,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0,0.280901613404497,0.204154171254893,0.61417158655884,0.103325781175765,0,0,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0,0.919463387397059,0,0,0.179389635688862,0,0,0,0,0,0,0.843881661206331,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.737930631258681,0.171567810298526,0,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,2.95597942737566,0.44024217006613,0.829312462163088,0.432359860250884,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.399891964728228,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0.308419387605311,0,0,0,0,0.604297247958111,0.40101294060657,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0.616194468458578,0,0.137836572484531,0.429680979473094,0.435050081742686,0,0.356128142586949,0,0.384380134730212,3.31793052485919,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,1.13654458722565,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0,1.38141957765574,0,0.102268682502155,0,0.311039587661807,0.449341755736634,0.895105873378046,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,1.01701460117107,0.236387681767936,0.689486746482929,0,0,0,0.361789315876224,0,0.663475559587348,0.295547618953547,0.219385397153973,0,0.139423744278603,0.692552326534174,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0.565412285735763,0,0,0.796118080530053,1.83309043480088,0.296521128680622,0,0,0.134802265961354,0.802577647298789,0,0,0.391329237864179,0.242780379534093,0,6.04953580243319,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.783532859223623,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0,0.176512253383001,0.677942222341597,0.411125773940253,0,0.316553979779393,0.977756913674015,0.240476460754601,0.640358984218058,0.19980960958213,0.864542502924636,0,1.20116498503375,0.288109595976299,0.248505071130865,0,0.135904206073614,0.313808538937,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0,0.223171457441873,0.335917362433631,0,0,0.630265458457789,1.2362378757175,1.48287796479207,0.0984274815147488,0.0846733320657845,0,0.817220436669454,1.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| |||
|short_description=p@chr2:201284451..201284455,+ | |||
}} |
Revision as of 07:49, 21 January 2014
Short description: | p@chr2:201284451..201284455, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:201284451..201284455, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.33e-16 | 2 |
alveolar duct | 2.33e-16 | 2 |
bronchiole | 2.33e-16 | 2 |
pulmonary alveolus epithelium | 3.17e-11 | 3 |
alveolus | 3.17e-11 | 3 |
pulmonary lobule | 3.17e-11 | 3 |
lobule | 3.17e-11 | 3 |
alveolus of lung | 3.17e-11 | 3 |
alveolar system | 3.17e-11 | 3 |
pulmonary acinus | 3.17e-11 | 3 |
alveolar sac | 3.17e-11 | 3 |
alveolar wall | 3.17e-11 | 3 |
sac | 1.71e-10 | 26 |
vermiform appendix | 1.84e-09 | 1 |
caecum | 1.84e-09 | 1 |
midgut | 1.84e-09 | 1 |
seminal vesicle | 2.35e-09 | 1 |
seminal fluid secreting gland | 2.35e-09 | 1 |
epithelial sac | 9.87e-08 | 25 |
intestine | 1.77e-07 | 17 |
lower digestive tract | 1.83e-07 | 5 |
large intestine | 2.95e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.33e-16 | 2 |
non-small cell lung carcinoma | 4.43e-07 | 5 |