FFCP PHASE1:Hg19::chr2:149052089..149052093,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:149052089..149052093,+ | |||
|id=chr2:149052089..149052093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002504;5.47e-07;3!CL:1000279;5.47e-07;3!CL:1000280;5.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.30e-07,3;CL:1000279,8.30e-07,3;CL:1000280,8.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.44e-19!115;UBERON:0001049!5.38e-15!57;UBERON:0005068!5.38e-15!57;UBERON:0006241!5.38e-15!57;UBERON:0007135!5.38e-15!57;UBERON:0002616!2.00e-13!59;UBERON:0002780!3.26e-13!41;UBERON:0001890!3.26e-13!41;UBERON:0006240!3.26e-13!41;UBERON:0000955!7.17e-13!69;UBERON:0006238!7.17e-13!69;UBERON:0003080!1.36e-12!42;UBERON:0001017!1.86e-11!82;UBERON:0000073!3.16e-11!94;UBERON:0001016!3.16e-11!94;UBERON:0003075!9.86e-11!86;UBERON:0007284!9.86e-11!86;UBERON:0005743!1.25e-10!86;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0002346!2.93e-10!90;UBERON:0001893!4.09e-10!34;UBERON:0002791!8.92e-10!33;UBERON:0003056!3.45e-09!61;UBERON:0001869!3.79e-09!32;UBERON:0000153!7.69e-09!129;UBERON:0007811!7.69e-09!129;UBERON:0000033!2.88e-07!123;UBERON:0002619!3.03e-07!22;UBERON:0000956!3.21e-07!25;UBERON:0000203!3.21e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.16e-10;4!UBERON:0010133;1.16e-10;4!UBERON:0002784;1.16e-10;4!UBERON:0001894;2.41e-10;7!UBERON:0001905;4.36e-10;2!UBERON:0002702;4.36e-10;2!UBERON:0002757;4.36e-10;2!UBERON:0010134;4.36e-10;2!UBERON:0005408;4.36e-10;2!UBERON:0001899;4.36e-10;2!UBERON:0001870;5.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,7.33e-11,4;UBERON:0003296,9.89e-11,4;UBERON:0010133,9.89e-11,4;UBERON:0001894,1.64e-10,7;UBERON:0006222,1.64e-10,7;UBERON:0001905,3.83e-10,2;UBERON:0002757,3.83e-10,2;UBERON:0010134,3.83e-10,2;UBERON:0005408,3.83e-10,2;UBERON:0001899,3.83e-10,2;UBERON:0002702,4.81e-10,2;UBERON:0002346,2.50e-09,86;UBERON:0001049,1.03e-08,56;UBERON:0005068,1.03e-08,56;UBERON:0006241,1.03e-08,56;UBERON:0007135,1.03e-08,56;UBERON:0002780,1.08e-08,41;UBERON:0001890,1.08e-08,41;UBERON:0003080,1.08e-08,41;UBERON:0006240,1.08e-08,41;UBERON:0003075,1.32e-08,82;UBERON:0007284,1.32e-08,82;UBERON:0000073,8.39e-08,53;UBERON:0002616,8.39e-08,53;UBERON:0003056,9.53e-08,61;UBERON:0010371,3.68e-07,104;UBERON:0001870,5.83e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.502170558379211,0.382067028739756,0.492603536699674,0.550975469195755,0,0,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,1.10799081706375,0.200544447470142,0,0.447830948479849,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,0,0.526768169550154,0.393419540227666,2.35806457649499,0.411202997999018,0,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0.664601683750863,0,0.896639238079726,0.130059347559878,0.493313713811028,0.829050053357545,0,0.593146252648242,0.535081656179426,0,0.226618685395132,0.766440987203842,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0.403213486449465,3.20928234940209,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,1.03988298880475,0.886917589850256,0.43917392846563,0.327447688744282,0.364295288292542,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.803697554556718,0.898117490504679,0.337834441449967,0,0,0,0,0,0,0,0,0.662045904066094,1.72101972449288,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0,0,0.140450806702248,0,0.368502951935304,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.337552664482532,0.194874010322397,1.51460264546469,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,1.43833425785268,0.358121926479791,0.112085143993527,0.197030760201927,1.07813787429759,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.74709290462411,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.580066775656914,0.255679882248303,0.0890320356467374,0,0.192190067365106,1.14851441245126,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0,2.33834194858309,1.09814811894422,0.824686816419805,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0.459446800413919,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0,0,0,0.228234679033192,0,2.50634477090067,0,0,0,0,1.03051603426729,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.984685914873589,1.11308705022906,0,0.211125408127993,0.19924798825107,0,0,0.306806047506464,0.615424027305347,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0.262379999988587,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0,0.868124974666461,0,0.723578631752448,0,2.32216445855572,0.591095237907095,0.219385397153973,0,0.139423744278603,0.538651809526579,0.683652335082007,0.23056390438806,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,1.02193298195737,0.470940769185074,0,0,0,0,0,0.158936578980379,0,0.489698424477443,0,0,0,0.265372693510018,0,0,0.247127877893006,0.313265848516366,0.337005664903385,0,0,0.182454789215666,0,0.242780379534093,0,0,0.61214552326098,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0.176512253383001,0,0,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.229073192331831,1.02956998717179,0.288109595976299,0.49701014226173,0,0.135904206073614,0.313808538937,0.407992870545287,0,0.600420288709789,0.684526894459965,0,0.429765441419957,1.31443677139657,1.67569440763353,0.458320848023367,0,0.399358000997982,0,0,0.134366944973453,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0.795229689809303,1.49823746722733,0,0,0,0,0,0.425246896606173,0.335434687599266,0.157611414598396,0.104909176269996,0,0.35857467866569,0,0,0,2.034148301238,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.646414781807753,0.92562821219883,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0,0,0.306345576763462,0,0,2.65820453990096,0.488105059607853,1.251909307065,0,0.776503360757966,0.434674820589684,0.691743174681154,0,0.151649117541648,0.570930667089935,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,1.53744911152768,0,0,0.829550616910385,0,0,0,0,0,0,0.39997479170986,0,0,0,0.368211900503681,0.139879507719444,0,0.383683113910955,0,0.157265941855896,0,0,0,1.36329340684902,0,0.636008701306837,0.23658523500376,0,0,0.3062454773532,0.0642292250964595,0,0.957803154342908,0,0.252071696221718,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,1.56302802246618,0.261906694481422,0,0,0.337687923091973,0.781078098613847,1.86018116851066,0.126831620387814,0,0.548257766857182,0,0,0.255524855279191,2.67850917939143,1.3451348888753,0.606965604236632,1.36597314810779,0.0887023701626388,0.460935950223117,0.171488009437418,0.271878931907327,0.0657727735628491,0,0.333694205676207,0.078493092850514,1.09980912941201,0,1.82631744101899,0.215927591218621,0.47775168788705,0.214429632529969,0,0.116241425368125,0,0,0.62164849248911,0.6828739083758,1.38251932362818,0.860454717640555,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0.955538938977433,0.223710863595585,0.098150233615243,0.121917924982269,0,0.205325613712494,0,1.45713297917742,0,0,0,0.90356865631168,0,0,0.308696632431779,0,0,1.22574160876953,0,1.17785080268967,0.594092800654172,0.8453114551668,0.169927114687817,0.0939839179798536,0.128915775947154,2.99823467774787,0,0,0,0.730336388246517,0,1.29005624836306,0,0.271965960763659,0,0,0,0,0,0.378499274505237,0.546327859818478,0,0.101988829741982,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,1.65833887891756,0.517164979309476,0.426467963801962,1.90451545170992,0.193766729508018,0.620747142958579,0,0.12729431655633,0.202117188958219,0,0,0.0673520530145875,0.430333232356058,0.332660356546013,0,0.106727345877715,3.8614456457388,0,0,0.977931553462932,0.406896178315738,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr2:149052089..149052093,+ | |||
}} |
Revision as of 05:52, 21 January 2014
Short description: | p@chr2:149052089..149052093, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:149052089..149052093, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.30e-07 | 3 |
smooth muscle cell of large intestine | 8.30e-07 | 3 |
smooth muscle cell of colon | 8.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 7.33e-11 | 4 |
gland of diencephalon | 9.89e-11 | 4 |
neuroendocrine gland | 9.89e-11 | 4 |
diencephalon | 1.64e-10 | 7 |
future diencephalon | 1.64e-10 | 7 |
pineal body | 3.83e-10 | 2 |
regional part of epithalamus | 3.83e-10 | 2 |
secretory circumventricular organ | 3.83e-10 | 2 |
circumventricular organ | 3.83e-10 | 2 |
epithalamus | 3.83e-10 | 2 |
middle frontal gyrus | 4.81e-10 | 2 |
neurectoderm | 2.50e-09 | 86 |
neural tube | 1.03e-08 | 56 |
neural rod | 1.03e-08 | 56 |
future spinal cord | 1.03e-08 | 56 |
neural keel | 1.03e-08 | 56 |
regional part of forebrain | 1.08e-08 | 41 |
forebrain | 1.08e-08 | 41 |
anterior neural tube | 1.08e-08 | 41 |
future forebrain | 1.08e-08 | 41 |
neural plate | 1.32e-08 | 82 |
presumptive neural plate | 1.32e-08 | 82 |
regional part of nervous system | 8.39e-08 | 53 |
regional part of brain | 8.39e-08 | 53 |
pre-chordal neural plate | 9.53e-08 | 61 |
ecto-epithelium | 3.68e-07 | 104 |
frontal cortex | 5.83e-07 | 3 |