FFCP PHASE1:Hg19::chr2:87017652..87017670,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_at_chr2:87017652..87017670,- | |||
|id=chr2:87017652..87017670,- | |||
|ontology_enrichment_celltype=CL:0000625!1.08e-39!11;CL:0000791!1.70e-27!18;CL:0000789!1.70e-27!18;CL:0002420!1.70e-27!18;CL:0002419!1.70e-27!18;CL:0000790!1.70e-27!18;CL:0000084!2.67e-22!25;CL:0000827!2.67e-22!25;CL:0000838!2.38e-16!52;CL:0000542!5.84e-16!53;CL:0000051!5.84e-16!53;CL:0000623!7.57e-12!3;CL:0000825!7.57e-12!3;CL:0000738!1.04e-11!140;CL:0000842!3.85e-11!3;CL:0002087!3.81e-10!119;CL:0000224!1.85e-08!4;CL:0000037!2.36e-08!172;CL:0000566!2.36e-08!172;CL:0000988!1.47e-07!182;CL:0002031!9.85e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.60e-94;11!CL:0000791;3.28e-57;18!CL:0000789;3.28e-57;18!CL:0002419;3.28e-57;18!CL:0000084;7.29e-41;25!CL:0000623;1.39e-31;3!CL:0000542;1.77e-16;53!CL:0002087;7.86e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.77e-94,11;CL:0000791,2.60e-57,18;CL:0000789,2.60e-57,18;CL:0002420,2.60e-57,18;CL:0002419,2.60e-57,18;CL:0000790,2.60e-57,18;CL:0000084,6.16e-41,25;CL:0000827,6.16e-41,25;CL:0000838,2.83e-32,52;CL:0000542,1.24e-31,53;CL:0000051,1.24e-31,53;CL:0000623,1.62e-31,3;CL:0000825,1.62e-31,3;CL:0002087,1.96e-13,115;CL:0000738,5.31e-13,136;CL:0002031,8.48e-13,120;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0000037,3.88e-10,168;CL:0000988,1.62e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.28e-57;18!CL:0000051;1.77e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.32e-12!7;UBERON:0007023!7.38e-11!115;UBERON:0002370!7.25e-09!4;UBERON:0005058!7.25e-09!4;UBERON:0009113!7.25e-09!4;UBERON:0003295!7.25e-09!4;UBERON:0005562!7.25e-09!4;UBERON:0002360!1.63e-07!2;UBERON:0000094!1.63e-07!2;UBERON:0007645!1.63e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.42e-22;2!UBERON:0005058;2.42e-22;2!UBERON:0009113;2.42e-22;2!UBERON:0004177;1.65e-09;5!UBERON:0005057;1.65e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.26e-11,4;UBERON:0005058,1.26e-11,4;UBERON:0009113,1.26e-11,4;UBERON:0003295,1.26e-11,4;UBERON:0005562,1.26e-11,4;UBERON:0003351,4.82e-08,6;UBERON:0004177,5.19e-07,7;UBERON:0005057,5.19e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.637130828648193,2.60433381542567,1.90090408889675,2.71035214339991,3.83959833463255,3.74792179657038,2.13099526839615,4.10563998460523,3.83052812126992,5.34880391567015,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,2.56139988262505,2.15627574859517,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0.939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,10.334225573761,2.29676442894674,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,1.81146414231924,0 | |||
|short_description=p@chr2:87017652..87017670,- | |||
}} |
Revision as of 04:19, 21 January 2014
Short description: | p@chr2:87017652..87017670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:87017652..87017670, - |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.77e-94 | 11 |
mature alpha-beta T cell | 2.60e-57 | 18 |
alpha-beta T cell | 2.60e-57 | 18 |
immature T cell | 2.60e-57 | 18 |
mature T cell | 2.60e-57 | 18 |
immature alpha-beta T cell | 2.60e-57 | 18 |
T cell | 6.16e-41 | 25 |
pro-T cell | 6.16e-41 | 25 |
lymphoid lineage restricted progenitor cell | 2.83e-32 | 52 |
lymphocyte | 1.24e-31 | 53 |
common lymphoid progenitor | 1.24e-31 | 53 |
natural killer cell | 1.62e-31 | 3 |
pro-NK cell | 1.62e-31 | 3 |
nongranular leukocyte | 1.96e-13 | 115 |
leukocyte | 5.31e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 8.48e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.14e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-10 | 161 |
hematopoietic stem cell | 3.88e-10 | 168 |
hematopoietic cell | 1.62e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.26e-11 | 4 |
hemolymphoid system gland | 1.26e-11 | 4 |
thymic region | 1.26e-11 | 4 |
pharyngeal gland | 1.26e-11 | 4 |
thymus primordium | 1.26e-11 | 4 |
pharyngeal epithelium | 4.82e-08 | 6 |
hemopoietic organ | 5.19e-07 | 7 |
immune organ | 5.19e-07 | 7 |