FFCP PHASE1:Hg19::chr2:21231676..21231681,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=not | |||
|UniProt=Q13789 | |||
|association_with_transcript=-160bp_to_X03324_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_75_at_APOB_5end | |||
|id=chr2:21231676..21231681,- | |||
|ontology_enrichment_celltype=CL:0000181!9.46e-43!12;CL:0000417!9.46e-43!12;CL:0000668!9.46e-43!12;CL:0000414!9.46e-43!12;CL:0000412!9.46e-43!12;CL:0000182!9.46e-43!12;CL:0000223!9.05e-15!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.96e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.49e-59,12;CL:0000223,1.45e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.68e-64;11!UBERON:0009497;4.82e-54;13!UBERON:0001041;9.42e-24;30!UBERON:0003104;6.25e-23;31!CL:0000223;7.14e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.53e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.31e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.58e-47!19;UBERON:0006925!1.58e-47!19;UBERON:0008836!1.58e-47!19;UBERON:0008835!5.52e-41!22;UBERON:0003894!5.52e-41!22;UBERON:0009854!3.50e-39!23;UBERON:0007499!5.23e-36!25;UBERON:0009497!5.23e-36!25;UBERON:0000015!5.23e-36!25;UBERON:0002423!5.23e-36!25;UBERON:0006235!5.23e-36!25;UBERON:0004161!5.23e-36!25;UBERON:0005057!1.33e-34!26;UBERON:0009856!1.33e-34!26;UBERON:0002365!6.16e-29!31;UBERON:0002330!6.16e-29!31;UBERON:0002368!1.45e-25!35;UBERON:0003929!2.27e-25!54;UBERON:0000949!9.43e-20!45;UBERON:0002530!8.69e-19!59;UBERON:0005911!2.20e-16!82;UBERON:0005172!4.82e-16!55;UBERON:0005173!4.82e-16!55;UBERON:0004921!1.52e-14!129;UBERON:0004185!1.52e-14!129;UBERON:0002417!2.13e-14!61;UBERON:0000916!2.13e-14!61;UBERON:0001007!6.59e-12!155;UBERON:0001555!6.59e-12!155;UBERON:0007026!6.59e-12!155;UBERON:0004119!8.08e-11!169;UBERON:0000925!8.08e-11!169;UBERON:0006595!8.08e-11!169;UBERON:0000490!2.64e-09!138;UBERON:0001041!1.10e-08!98;UBERON:0000077!4.95e-08!130;UBERON:0005177!6.86e-08!107;UBERON:0009569!1.98e-07!113;UBERON:0002405!3.24e-07!115;UBERON:0005256!3.27e-07!143;UBERON:0003914!4.43e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.97e-72;19!UBERON:0006925;1.97e-72;19!UBERON:0002423;3.43e-55;25!UBERON:0002365;1.81e-42;31!UBERON:0002330;1.81e-42;31!UBERON:0002368;7.83e-37;33!UBERON:0000949;7.73e-27;43!UBERON:0005172;2.35e-16;52!UBERON:0005173;2.35e-16;52!UBERON:0002417;2.14e-15;58!UBERON:0000916;2.14e-15;58!UBERON:0002530;2.98e-14;57!UBERON:0001007;1.67e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.97e-72,19;UBERON:0006925,1.97e-72,19;UBERON:0008836,1.97e-72,19;UBERON:0008835,1.23e-62,22;UBERON:0003894,1.23e-62,22;UBERON:0009854,6.11e-60,23;UBERON:0007499,3.43e-55,25;UBERON:0009497,3.43e-55,25;UBERON:0000015,3.43e-55,25;UBERON:0002423,3.43e-55,25;UBERON:0006235,3.43e-55,25;UBERON:0004161,3.43e-55,25;UBERON:0009856,4.32e-53,26;UBERON:0002365,1.29e-44,31;UBERON:0002330,1.29e-44,31;UBERON:0002368,1.42e-39,35;UBERON:0000949,6.99e-31,45;UBERON:0003929,8.37e-26,54;UBERON:0005172,8.37e-26,54;UBERON:0005173,8.37e-26,54;UBERON:0002530,1.20e-23,59;UBERON:0002417,2.92e-23,60;UBERON:0000916,2.92e-23,60;UBERON:0005911,4.16e-17,82;UBERON:0001041,3.85e-16,87;UBERON:0005177,6.14e-14,101;UBERON:0009569,1.36e-12,112;UBERON:0003914,4.62e-12,117;UBERON:0004921,7.31e-12,118;UBERON:0005256,1.42e-11,122;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000490,1.43e-09,148;UBERON:0001048,7.33e-09,160;UBERON:0003104,7.33e-09,160;UBERON:0009142,7.33e-09,160;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000025,2.32e-07,192;UBERON:0002100,3.86e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,3.54473944008842,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.7307330260045,1.28066733322951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p75@APOB | |||
}} |
Revision as of 01:59, 21 January 2014
Short description: | p75@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_75_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -160bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.49e-59 | 12 |
endodermal cell | 1.45e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.31e-07 | 39 |