FFCP PHASE1:Hg19::chr2:20424783..20424794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10658 | |||
|TSSclassifier=strong | |||
|UniProt=F8WCX9 | |||
|association_with_transcript=60bp_to_ENST00000447124_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_4_at_SDC1_5end | |||
|id=chr2:20424783..20424794,- | |||
|ontology_enrichment_celltype=CL:0000066!6.10e-26!254;CL:0000223!7.02e-17!59;CL:0000220!3.32e-16!246;CL:0002076!3.44e-16!43;CL:0002321!3.91e-16!248;CL:0002368!5.17e-09!13;CL:0000055!4.04e-07!180;CL:0002159!4.21e-07!13;CL:0000548!5.04e-07!679;CL:0000004!5.04e-07!679;CL:0000255!5.04e-07!679;CL:0002202!9.80e-07!9;CL:0002632!9.80e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.60e-13;42!CL:0002368;1.46e-10;13!CL:0002202;7.61e-08;9!CL:0002632;7.61e-08;9!CL:0000349;7.27e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.18e-24,253;CL:0002076,1.77e-17,42;CL:0000223,2.15e-17,58;CL:0002321,1.50e-10,250;CL:0002368,1.52e-10,13;CL:0002202,8.36e-08,9;CL:0002632,8.36e-08,9;CL:0000349,4.50e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;7.62e-10;58 | |||
|ontology_enrichment_disease=DOID:305!4.96e-11!106;DOID:0050687!1.02e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.09e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.44e-27!169;UBERON:0000925!8.44e-27!169;UBERON:0006595!8.44e-27!169;UBERON:0003104!5.37e-21!238;UBERON:0009142!5.37e-21!238;UBERON:0001007!2.67e-20!155;UBERON:0001555!2.67e-20!155;UBERON:0007026!2.67e-20!155;UBERON:0002100!1.98e-18!216;UBERON:0000475!5.90e-18!365;UBERON:0000077!8.24e-18!130;UBERON:0004921!2.39e-16!129;UBERON:0004185!2.39e-16!129;UBERON:0003102!6.91e-15!95;UBERON:0000481!8.68e-15!347;UBERON:0009569!2.38e-14!113;UBERON:0000466!6.26e-14!126;UBERON:0001004!1.14e-12!72;UBERON:0000464!5.35e-12!104;UBERON:0005911!1.08e-11!82;UBERON:0005177!4.17e-11!107;UBERON:0005256!5.62e-11!143;UBERON:0001041!7.10e-11!98;UBERON:0001008!9.88e-10!45;UBERON:0000468!9.98e-10!659;UBERON:0006554!1.12e-09!44;UBERON:0000065!1.52e-09!53;UBERON:0005153!1.98e-09!37;UBERON:0000161!4.59e-09!35;UBERON:0001048!7.07e-09!168;UBERON:0000064!9.80e-09!219;UBERON:0000480!1.53e-08!626;UBERON:0000467!1.93e-08!625;UBERON:0005178!2.46e-08!34;UBERON:0002224!2.46e-08!34;UBERON:0000062!2.85e-08!511;UBERON:0001444!5.13e-08!48;UBERON:0008947!5.21e-08!38;UBERON:0003258!5.21e-08!38;UBERON:0003100!6.82e-08!41;UBERON:0000915!7.20e-08!52;UBERON:0005157!8.27e-08!51;UBERON:0007196!8.89e-08!14;UBERON:0001558!8.89e-08!14;UBERON:0005181!1.06e-07!35;UBERON:0000063!1.11e-07!97;UBERON:0002417!2.22e-07!61;UBERON:0000916!2.22e-07!61;UBERON:0005631!2.63e-07!14;UBERON:0000158!2.63e-07!14;UBERON:0000072!3.27e-07!46;UBERON:0004923!6.27e-07!57;UBERON:0005156!8.30e-07!59;UBERON:0000990!8.30e-07!59;UBERON:0005172!9.42e-07!55;UBERON:0005173!9.42e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.54e-08;34!UBERON:0002224;1.54e-08;34!UBERON:0006554;3.47e-08;30!UBERON:0001008;3.47e-08;30!UBERON:0007196;5.64e-08;15!UBERON:0001558;5.64e-08;15!UBERON:0005181;5.77e-08;35!UBERON:0000065;8.70e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.78e-26,160;UBERON:0000925,1.78e-26,160;UBERON:0006595,1.78e-26,160;UBERON:0001007,1.43e-19,145;UBERON:0001555,1.43e-19,145;UBERON:0007026,1.43e-19,145;UBERON:0004921,5.33e-16,118;UBERON:0003102,2.52e-14,99;UBERON:0002100,8.34e-14,199;UBERON:0001008,2.40e-13,48;UBERON:0006554,2.74e-13,47;UBERON:0001004,3.79e-13,74;UBERON:0005177,5.31e-13,101;UBERON:0009569,1.19e-12,112;UBERON:0005911,4.21e-12,82;UBERON:0005153,8.75e-11,37;UBERON:0001041,1.79e-10,87;UBERON:0000065,3.12e-10,54;UBERON:0005157,4.75e-10,47;UBERON:0005178,1.12e-09,34;UBERON:0002224,1.12e-09,34;UBERON:0000161,2.23e-09,36;UBERON:0005181,4.14e-09,35;UBERON:0008947,1.20e-08,38;UBERON:0003258,1.20e-08,38;UBERON:0005631,1.72e-08,14;UBERON:0000158,1.72e-08,14;UBERON:0007196,4.45e-08,15;UBERON:0001558,4.45e-08,15;UBERON:0000915,1.49e-07,52;UBERON:0000072,1.56e-07,47;UBERON:0000033,1.83e-07,56;UBERON:0003104,2.29e-07,160;UBERON:0009142,2.29e-07,160;UBERON:0003100,4.06e-07,41 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,2.00146596706261,2.23480547213644,0.872338524100369,2.53299878168311,0.631719873426831,0.522371256399677,5.16041266653169,14.653824527421,16.1646615376327,15.8260186937072,0,0,4.70627602516243,4.21886169616784,5.11217063271161,4.87932798790507,4.67860020691794,7.95602695852587,0.940364164434263,0.85870796139317,3.42186062682211,1.63205431473244,0.305653622991805,0.410502947249729,0.157421562627358,0,0,0,16.5495820406207,42.7712404665115,35.8661389861784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,0.50133791063589,0.434539556882471,4.7717156823066,1.45990461090791,1.32348744029695,2.88248216701333,1.66886092816939,2.22664428346111,63.7516754511949,43.3817798057782,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,31.3987717542625,0,0.506522046658319,0.926864265692532,3.72887606973458,0,1.68203280042692,0,0.74000264525148,0,0.134710672069688,0,0.908144565869588,0,0.468642863667593,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0,0.368502951935304,0.103325781175765,8.31602000097437,1.97813543422845,0.910161361938026,1.43723628363248,1.34668891163253,0.375355559615893,1.10825646193673,2.63386572528503,1.22595118319608,1.20190447125277,0,3.58779271377724,0.640672166455702,0.211931901159562,4.50136644126603,1.44273540933814,2.83404594050192,2.60563598864226,8.10126394758078,2.63079913935236,1.26216887122057,0.644349290496095,2.58633690910099,3.55009592516614,1.61203357164224,3.05209066158878,54.8860822983763,37.0934724003535,38.7186203775155,0.731842236777572,0.265059536642971,0.813357600086629,0.518305275076852,1.00928340350251,0.36497735907583,14.0804579096834,9.64861407289328,4.14404764057442,0.464367928031979,0,1.18306800039844,1.34867752062481,1.92808823906786,1.65440959098591,0.871517776369625,1.18635309555548,1.07865046528132,1.96221465125346,1.53898862778556,0,0,0.4115740113314,1.47008711385542,29.1536580090211,3.9313088667105,14.1789577603537,0,2.33678033231916,1.20097467208968,65.959921530584,38.2165961075906,30.5608076131358,12.0364978706088,0.325808305310325,1.03993478527958,1.44331342025273,0.927443239800615,0.821860859650752,0,0,0,3.1608175918371,3.43394464837949,0,0.702012795417713,0.148631162288728,33.7441802352397,39.475800126732,22.8257906560242,28.7482857876143,40.3981174534407,37.5715025581907,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0.600686115687835,0.285826432630578,6.2793407233402,3.48768055066624,4.6936502925408,1.80980402060889,0,0,1.86156681609409,4.16029747645464,0,0,1.3321108950805,0,10.8524321078289,1.64648067356154,0.977208552881205,0,1.58390374586686,0.602878754119172,0,0.399891964728228,0,0,0,0.239624855491583,0,17.1164286048862,0.289562613335158,0,0.716243852959582,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,1.24782516918484,5.35286966391485,3.15404830067869,2.34282829985426,0,0,1.03473071292505,1.99267679560631,1.47495334833363,5.64743494042539,1.95801157462741,1.37257369524342,0,0,0,7.27506171471023,23.3009615314696,8.16453791990137,0.496215615637554,1.84154367945675,2.24528075546459,0.896974044789907,4.60536524160033,1.60853921143608,1.48418066444991,7.86469438393543,13.8498145744239,8.45909706942234,5.19254429183621,11.6210378459959,3.74664293734029,53.1342146303705,28.8213495369355,1.14814448164607,1.45672934405374,1.44236856455367,4.51199612907412,2.38747545023686,10.1965469992991,11.6911379722609,1.47772280450026,1.13733384070897,0,1.29549549661284,0,2.70946437543853,2.50844886927427,7.39141191830611,5.81753206250107,6.49236788694317,0,0,1.79515087581472,0,0.976135183992909,11.4375522928972,0.640986253728404,0.330037999682352,22.9706215198469,24.0522291033513,0,0.96670718292122,0.462145851343933,0.460511024178389,0.551346289938122,0.537101224341368,0.580066775656914,1.10794615640931,1.24644849905432,19.6689049279564,19.2190067365106,5.99779748724545,18.6130316774212,0.464845549297286,4.40737285562896,2.0911118104818,0,0.532306030317022,0.869932992075073,1.11194531462352,0.143124886741991,4.09374206295634,1.58189712359363,1.33441135746677,4.86205803491534,0.855877976067841,1.90921948755562,0.78494864019923,1.61885211824983,1.09814811894422,1.29593642580255,1.41527737101321,0,1.68503382495592,2.43816869544795,0.243713489631284,3.16950440270266,2.04749867111979,1.1312434556297,3.39024349860728,1.10273068709225,1.99031692572366,0.438450885253763,4.05142873986681,1.31178950409327,0.202910376962704,2.478587984798,1.40847801266121,2.43799298746888,0.392996164052485,0.35667105148125,6.38569915327076,0,0.329294892959902,5.31262443272001,4.54915136318478,24.15175029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|short_description=p4@SDC1 | |||
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Revision as of 01:56, 21 January 2014
Short description: | p4@SDC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SDC1_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 60bp_to_ENST00000447124_5end |
EntrezGene: | SDC1 |
HGNC: | 10658 |
UniProt: | F8WCX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 8.18e-24 | 253 |
endo-epithelial cell | 1.77e-17 | 42 |
endodermal cell | 2.15e-17 | 58 |
embryonic cell | 1.50e-10 | 250 |
respiratory epithelial cell | 1.52e-10 | 13 |
epithelial cell of tracheobronchial tree | 8.36e-08 | 9 |
epithelial cell of lower respiratory tract | 8.36e-08 | 9 |
extraembryonic cell | 4.50e-07 | 19 |
Ontology term | p-value | n |
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carcinoma | 9.09e-08 | 106 |