FFCP PHASE1:Hg19::chr19:51485047..51485074,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:51485047..51485074,- | |||
|id=chr19:51485047..51485074,- | |||
|ontology_enrichment_celltype=CL:0000575!2.33e-09!2;CL:0002537!1.99e-08!5;CL:0002159!1.78e-07!13;CL:0000239!8.85e-07!3;CL:1000615!8.85e-07!3;CL:0002306!8.85e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.85e-12;3!CL:0002327;1.63e-09;4!CL:0002537;7.25e-08;5!CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.85e-12,3;CL:0002327,1.70e-09,4;CL:0002537,7.01e-08,5;CL:0002149,7.58e-07,6;CL:0002255,7.58e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.67e-18;2!UBERON:0010056;7.67e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;7.67e-18;2!DOID:3001;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,9.07e-18,2;DOID:3001,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006853!8.85e-07!3;UBERON:0007685!8.85e-07!3;UBERON:0004134!8.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;3.61e-34;1!UBERON:0003703;3.61e-34;1!UBERON:0001174;3.61e-34;1!UBERON:0004914;3.61e-34;1!UBERON:0001723;2.31e-12;3!UBERON:0002114;2.31e-12;2!UBERON:0001033;2.31e-12;3!UBERON:0002394;1.32e-09;4!UBERON:0003928;1.32e-09;4!UBERON:0001911;1.63e-09;4!UBERON:0002108;6.13e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.05e-34,1;UBERON:0003703,5.05e-34,1;UBERON:0001174,5.05e-34,1;UBERON:0004914,5.05e-34,1;UBERON:0001723,2.31e-12,3;UBERON:0001033,2.31e-12,3;UBERON:0010056,2.31e-12,3;UBERON:0002114,2.59e-12,2;UBERON:0001911,1.70e-09,4;UBERON:0005333,1.70e-09,4;UBERON:0008425,1.70e-09,4;UBERON:0005311,1.70e-09,4;UBERON:0002108,6.55e-08,4;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03867263488458,0,0,0,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0.799238438328521,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36569737947272,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0,2.97838929107265,0,0,0,0,0.487671699929078,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,2.61260097476354,0,0.202056159043763,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr19:51485047..51485074,- | |||
}} |
Revision as of 00:44, 21 January 2014
Short description: | p@chr19:51485047..51485074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:51485047..51485074, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.85e-12 | 3 |
mammary gland epithelial cell | 1.70e-09 | 4 |
amnion mesenchymal stem cell | 7.01e-08 | 5 |
epithelial cell of uterus | 7.58e-07 | 6 |
stromal cell of endometrium | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.05e-34 | 1 |
extrahepatic bile duct | 5.05e-34 | 1 |
common bile duct | 5.05e-34 | 1 |
duodenal papilla | 5.05e-34 | 1 |
tongue | 2.31e-12 | 3 |
gustatory system | 2.31e-12 | 3 |
future tongue | 2.31e-12 | 3 |
duodenum | 2.59e-12 | 2 |
mammary gland | 1.70e-09 | 4 |
mammary bud | 1.70e-09 | 4 |
mammary ridge | 1.70e-09 | 4 |
mammary placode | 1.70e-09 | 4 |
small intestine | 6.55e-08 | 4 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 9.07e-18 | 2 |
female reproductive endometrioid cancer | 7.58e-07 | 6 |