FFCP PHASE1:Hg19::chr19:40847829..40847880,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26723 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_uc002ong.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_C19orf47_5end | |||
|id=chr19:40847829..40847880,- | |||
|ontology_enrichment_celltype=CL:0000188!7.14e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.89e-13;19!CL:0002577;2.23e-11;3!CL:0002623;5.47e-11;3!CL:0002541;1.05e-10;3!CL:0002536;7.51e-08;2!CL:0000622;9.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.43e-13,19;CL:0002577,2.36e-11,3;CL:0002623,6.29e-11,3;CL:0002541,9.18e-11,3;CL:0002536,7.01e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.70e-09;4!UBERON:0007284;6.70e-09;4!UBERON:0004872;4.01e-08;7!UBERON:0006965;9.59e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.88e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.89e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.27e-24!115;UBERON:0005631!7.31e-16!14;UBERON:0000158!7.31e-16!14;UBERON:0003124!3.58e-12!7;UBERON:0001044!1.63e-10!6;UBERON:0003293!1.63e-10!6;UBERON:0003294!1.63e-10!6;UBERON:0010047!1.63e-10!6;UBERON:0000167!1.63e-10!6;UBERON:0000478!1.50e-09!24;UBERON:0000078!5.54e-08!18;UBERON:0001987!9.79e-08!4;UBERON:0004340!9.79e-08!4;UBERON:0004923!1.68e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.16e-20;16!UBERON:0002036;2.16e-20;16!UBERON:0000478;4.16e-15;24!UBERON:0001044;2.20e-14;6!UBERON:0003293;2.20e-14;6!UBERON:0003294;2.20e-14;6!UBERON:0010047;2.20e-14;6!UBERON:0003408;2.20e-14;6!UBERON:0000167;2.20e-14;6!UBERON:0001987;2.97e-14;4!UBERON:0003978;9.82e-12;3!UBERON:0000946;9.82e-12;3!UBERON:0004151;1.00e-11;3!UBERON:0005631;1.35e-11;10!UBERON:0000158;1.35e-11;10!UBERON:0003124;1.05e-10;3!UBERON:0000920;1.05e-10;3!UBERON:0007100;1.13e-10;25!UBERON:0002385;2.31e-09;31!UBERON:0001015;2.31e-09;31!UBERON:0000383;2.31e-09;31!UBERON:0005090;8.73e-09;2!UBERON:0001630;8.73e-09;2!UBERON:0000341;1.83e-08;2!UBERON:0001041;2.74e-08;14!UBERON:0002133;3.27e-08;2!UBERON:0002081;3.45e-08;2!UBERON:0003127;7.78e-08;2!UBERON:0000165;8.46e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.76e-23,7;UBERON:0005631,1.84e-22,14;UBERON:0000158,1.84e-22,14;UBERON:0000478,4.20e-15,24;UBERON:0001044,2.47e-14,6;UBERON:0003293,2.47e-14,6;UBERON:0003294,2.47e-14,6;UBERON:0010047,2.47e-14,6;UBERON:0000167,2.47e-14,6;UBERON:0001987,4.00e-14,4;UBERON:0004340,4.00e-14,4;UBERON:0007023,5.12e-12,114;UBERON:0003978,1.00e-11,3;UBERON:0009751,1.00e-11,3;UBERON:0000946,1.00e-11,3;UBERON:0002523,1.00e-11,3;UBERON:0005983,1.00e-11,3;UBERON:0002165,1.00e-11,3;UBERON:0002062,1.00e-11,3;UBERON:0007280,1.00e-11,3;UBERON:0004151,1.04e-11,3;UBERON:0000920,9.18e-11,3;UBERON:0007100,9.43e-10,27;UBERON:0000166,5.56e-09,22;UBERON:0005090,8.90e-09,2;UBERON:0001630,8.90e-09,2;UBERON:0003408,1.76e-08,10;UBERON:0000341,1.86e-08,2;UBERON:0002133,3.33e-08,2;UBERON:0002081,3.57e-08,2;UBERON:0010227,3.57e-08,2;UBERON:0003127,6.31e-08,2;UBERON:0003103,1.69e-07,68;UBERON:0004923,4.37e-07,66 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0,0,0,3.05817920982241,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31650090668127,0.61642896765115,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,7.89229874764969,0,0,0,3.03127571446259,13.3148351608398,4.5358543999452,0,0,0,0.384417447767103,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,1.06337790121334,0.616194468458578,0.921022048356777,1.51620229732984,0.107420244868274,0.725083469571143,2.13066568540252,15.3135101312388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0.95497793895076,1.48482340416319,0.307160702099232,0,0.140669416410513,0,0,0,4.5827037297746,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,17.3170799992468,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,1.91400695839152,1.28236630762607,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,20.8670188297685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2418000472609,0,0,0,0,1.93978032976839,0,2.03382666702479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,9.7748840445289,23.14520282518,4.30723814746088,47.5236021187599,87.1328877717239,40.1708623395371,27.007755939664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,8.5763439164804,25.8215868442518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60052752859992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0.0675375846183947,0,0.206686796501184,0,0,0.548257766857182,13.8939129949002,0,0,0,0,0,0,1.06442844195167,0,0,0.0679697329768317,0,0,0,0.941917114206168,0,0,0,0,0,0,0,0,0.869291361512897,0,1.24329698497822,3.58508801897295,7.60385627995501,4.30227358820278,0,0,0.423387050190929,0,0,0,0,0,0,40.1405879056495,58.4151371012046,12.7579587447202,5.34282092365053,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,4.58729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.606229585745915,0,0,0.103432995861895,14.7131447511677,9.04644839562213,0,0,0,0.509177266225319,2.22328907854041,15.8933225964782,28.063130688993,1.41439311330634,1.72133292942423,6.65320713092027,0,0,0,0,18.7712753922763,0,0,0,1.20764276154616,0 | |||
|short_description=p2@C19orf47 | |||
}} |
Revision as of 23:19, 20 January 2014
Short description: | p2@C19orf47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C19orf47_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -32bp_to_uc002ong.2_5end |
EntrezGene: | C19orf47 |
HGNC: | 26723 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.43e-13 | 19 |
placental epithelial cell | 2.36e-11 | 3 |
acinar cell of salivary gland | 6.29e-11 | 3 |
chorionic membrane mesenchymal stem cell | 9.18e-11 | 3 |
amniotic epithelial cell | 7.01e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.76e-23 | 7 |
extraembryonic membrane | 1.84e-22 | 14 |
membranous layer | 1.84e-22 | 14 |
extraembryonic structure | 4.20e-15 | 24 |
saliva-secreting gland | 2.47e-14 | 6 |
gland of oral region | 2.47e-14 | 6 |
gland of foregut | 2.47e-14 | 6 |
oral gland | 2.47e-14 | 6 |
oral cavity | 2.47e-14 | 6 |
placenta | 4.00e-14 | 4 |
allantois | 4.00e-14 | 4 |
adult organism | 5.12e-12 | 114 |
valve | 1.00e-11 | 3 |
cardiac mesenchyme | 1.00e-11 | 3 |
cardial valve | 1.00e-11 | 3 |
tunica intima | 1.00e-11 | 3 |
heart layer | 1.00e-11 | 3 |
endocardium | 1.00e-11 | 3 |
endocardial cushion | 1.00e-11 | 3 |
presumptive endocardium | 1.00e-11 | 3 |
cardiac chamber | 1.04e-11 | 3 |
egg chorion | 9.18e-11 | 3 |
primary circulatory organ | 9.43e-10 | 27 |
oral opening | 5.56e-09 | 22 |
muscle structure | 8.90e-09 | 2 |
muscle organ | 8.90e-09 | 2 |
gland of gut | 1.76e-08 | 10 |
throat | 1.86e-08 | 2 |
atrioventricular valve | 3.33e-08 | 2 |
cardiac atrium | 3.57e-08 | 2 |
future cardiac atrium | 3.57e-08 | 2 |
open tracheal system trachea | 6.31e-08 | 2 |
compound organ | 1.69e-07 | 68 |
organ component layer | 4.37e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.89e-09 | 2 |