FFCP PHASE1:Hg19::chr19:35485682..35485693,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57655 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29305 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZ02 | |||
|association_with_transcript=0bp_to_ENST00000453966,uc002nxi.1_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_14_at_GRAMD1A_5end | |||
|id=chr19:35485682..35485693,+ | |||
|ontology_enrichment_celltype=CL:0002618!1.09e-11!3;CL:0000071!3.55e-09!18;CL:0002546!3.55e-09!18;CL:0002139!1.29e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000746;9.46e-18;3!CL:0000737;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,9.46e-18,3;CL:0000513,9.46e-18,3;CL:0000737,1.13e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;9.18e-26;2!UBERON:0010056;9.18e-26;2!CL:0000513;9.46e-18;3!UBERON:0003104;3.36e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.80e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-22!115;UBERON:0001986!3.55e-09!18;UBERON:0004638!3.55e-09!18;UBERON:0004852!3.55e-09!18;UBERON:0001630!3.79e-09!2;UBERON:0005090!3.79e-09!2;UBERON:0000487!2.52e-07!22;UBERON:0002066!3.55e-07!5;UBERON:0002298!6.50e-07!8;UBERON:0000025!9.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.46e-50;1!UBERON:0000026;1.46e-50;1!UBERON:0008784;1.46e-50;1!UBERON:0006058;1.46e-50;1!UBERON:0003663;1.46e-50;1!UBERON:0004256;1.46e-50;1!UBERON:0004708;1.46e-50;1!UBERON:0002101;1.46e-50;1!UBERON:0004709;1.46e-50;1!UBERON:0002529;1.46e-50;1!UBERON:0010538;1.46e-50;1!UBERON:0003661;1.46e-50;1!UBERON:0010890;1.46e-50;1!UBERON:0002471;1.46e-50;1!UBERON:0001383;1.46e-50;1!UBERON:0010758;1.46e-50;1!UBERON:0010707;1.46e-50;1!UBERON:0000978;1.46e-50;1!UBERON:0002103;1.46e-50;1!UBERON:0001665;1.46e-50;1!UBERON:0003823;1.46e-50;1!UBERON:0000154;1.46e-50;1!UBERON:0010709;1.46e-50;1!UBERON:0005090;4.32e-26;2!UBERON:0001630;4.32e-26;2!UBERON:0001723;1.12e-17;3!UBERON:0001033;1.12e-17;3!UBERON:0001134;1.72e-13;16!UBERON:0002036;1.72e-13;16!UBERON:0002385;1.10e-07;31!UBERON:0001015;1.10e-07;31!UBERON:0000383;1.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.46e-50,1;UBERON:0001389,1.46e-50,1;UBERON:0000026,1.46e-50,1;UBERON:0008784,1.46e-50,1;UBERON:0006058,1.46e-50,1;UBERON:0003663,1.46e-50,1;UBERON:0004256,1.46e-50,1;UBERON:0004708,1.46e-50,1;UBERON:0002101,1.46e-50,1;UBERON:0004709,1.46e-50,1;UBERON:0002529,1.46e-50,1;UBERON:0010538,1.46e-50,1;UBERON:0003661,1.46e-50,1;UBERON:0010890,1.46e-50,1;UBERON:0002471,1.46e-50,1;UBERON:0001383,1.46e-50,1;UBERON:0004357,1.46e-50,1;UBERON:0004347,1.46e-50,1;UBERON:0005420,1.46e-50,1;UBERON:0005732,1.46e-50,1;UBERON:0010758,1.46e-50,1;UBERON:0010707,1.46e-50,1;UBERON:0000978,1.46e-50,1;UBERON:0002103,1.46e-50,1;UBERON:0001665,1.46e-50,1;UBERON:0003823,1.46e-50,1;UBERON:0000154,1.46e-50,1;UBERON:0010709,1.46e-50,1;UBERON:0005733,1.46e-50,1;UBERON:0005730,1.46e-50,1;UBERON:0005090,4.32e-26,2;UBERON:0001630,4.32e-26,2;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0001134,4.28e-08,62;UBERON:0002036,4.28e-08,62;UBERON:0003082,4.28e-08,62;UBERON:0002385,7.22e-08,64;UBERON:0001015,7.22e-08,64;UBERON:0000383,7.22e-08,64;UBERON:0002329,3.59e-07,71;UBERON:0003059,3.59e-07,71;UBERON:0007282,3.59e-07,71;UBERON:0004290,3.59e-07,71;UBERON:0009618,3.59e-07,71;UBERON:0003077,4.40e-07,72;UBERON:0007285,4.40e-07,72;UBERON:0007524,5.36e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.788662062837943,0,0,0,0.199679000498991,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0.157566364614447,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5960055809458,3.2852098193999,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.375935671919414,0.386747327841463,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,1.74173398317569,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p14@GRAMD1A | |||
}} |
Revision as of 22:41, 20 January 2014
Short description: | p14@GRAMD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GRAMD1A_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000453966, uc002nxi.1_5end |
EntrezGene: | GRAMD1A |
HGNC: | 29305 |
UniProt: | F5GZ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 9.46e-18 | 3 |
cardiac muscle myoblast | 9.46e-18 | 3 |
striated muscle cell | 1.13e-13 | 4 |