FFCP PHASE1:Hg19::chr18:54339823..54339834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13490 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4E6,A2RRE0 | |||
|association_with_transcript=76bp_to_AB384493,AF188125,AY099325,BC131558_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_8_at_WDR7_5end | |||
|id=chr18:54339823..54339834,+ | |||
|ontology_enrichment_celltype=CL:0005020!2.43e-23!6;CL:0002138!2.43e-23!6;CL:0005022!2.43e-23!6;CL:0002144!1.07e-17!3;CL:0002139!2.39e-17!24;CL:0000115!4.13e-17!35;CL:0002078!3.67e-13!44;CL:0000213!1.15e-09!57;CL:0000215!1.15e-09!57;CL:1000612!1.59e-07!7;CL:1000746!1.59e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.97e-84;3!CL:0002139;9.15e-30;24!CL:0002138;5.10e-20;6!CL:0002078;7.68e-19;45!CL:0000115;1.15e-18;36!CL:0000071;7.70e-15;18!CL:0000213;2.84e-13;58!CL:0000215;2.84e-13;58!CL:0002188;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.27e-84,3;CL:0002139,9.72e-30,24;CL:0000115,1.81e-28,36;CL:0002078,7.37e-23,45;CL:0005020,5.35e-20,6;CL:0002138,5.35e-20,6;CL:0005022,5.35e-20,6;CL:0000213,8.11e-18,58;CL:0000215,8.11e-18,58;CL:0000071,7.89e-15,18;CL:0002546,7.89e-15,18;CL:0000222,1.16e-08,121;CL:0002188,5.70e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;5.10e-20;6!CL:0002546;7.70e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!1.07e-17!3;UBERON:0001982!1.07e-17!3;UBERON:0001473!1.89e-17!8;UBERON:0004536!1.89e-17!8;UBERON:0006558!1.89e-17!8;UBERON:0002465!6.55e-14!10;UBERON:0000074!1.59e-07!7;UBERON:0001229!1.59e-07!7;UBERON:0001230!1.59e-07!7;UBERON:0005749!1.59e-07!7;UBERON:0004199!1.59e-07!7;UBERON:0004209!1.59e-07!7;UBERON:0004198!1.59e-07!7;UBERON:0002146!9.48e-07!1;UBERON:0005623!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.97e-84;3!UBERON:0001915;1.97e-84;3!UBERON:0001982;1.97e-84;3!UBERON:0001473;2.75e-15;8!UBERON:0004536;2.75e-15;8!UBERON:0006558;2.75e-15;8!UBERON:0004638;7.70e-15;18!UBERON:0001986;7.70e-15;18!UBERON:0004852;7.70e-15;18!UBERON:0002465;1.94e-12;10!UBERON:0000487;2.80e-12;22!UBERON:0006914;6.81e-11;25!UBERON:0000055;2.91e-08;65!UBERON:0000490;7.67e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.27e-84,3;UBERON:0001915,2.27e-84,3;UBERON:0001982,2.27e-84,3;UBERON:0001473,2.85e-15,8;UBERON:0004536,2.85e-15,8;UBERON:0006558,2.85e-15,8;UBERON:0004638,7.89e-15,18;UBERON:0001986,7.89e-15,18;UBERON:0004852,7.89e-15,18;UBERON:0002465,2.00e-12,10;UBERON:0000487,2.85e-12,22;UBERON:0006914,6.93e-11,25;UBERON:0000055,9.13e-11,68;UBERON:0002049,2.01e-09,78;UBERON:0007798,2.01e-09,78;UBERON:0004535,8.22e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,4.68608857870538,1.20848795132744,1.52054421143703,2.68468263302986,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59859605969933,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@WDR7 | |||
}} |
Revision as of 19:28, 20 January 2014
Short description: | p8@WDR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_WDR7_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 76bp_to_AB384493, AF188125, AY099325, BC131558_5end |
EntrezGene: | WDR7 |
HGNC: | 13490 |
UniProt: | Q9Y4E6A2RRE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.27e-84 | 3 |
endothelial cell of vascular tree | 9.72e-30 | 24 |
endothelial cell | 1.81e-28 | 36 |
meso-epithelial cell | 7.37e-23 | 45 |
lymphangioblast | 5.35e-20 | 6 |
endothelial cell of lymphatic vessel | 5.35e-20 | 6 |
vascular lymphangioblast | 5.35e-20 | 6 |
lining cell | 8.11e-18 | 58 |
barrier cell | 8.11e-18 | 58 |
blood vessel endothelial cell | 7.89e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.89e-15 | 18 |
mesodermal cell | 1.16e-08 | 121 |
glomerular endothelial cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.27e-84 | 3 |
endothelium of capillary | 2.27e-84 | 3 |
capillary | 2.27e-84 | 3 |
lymphatic vessel | 2.85e-15 | 8 |
lymph vasculature | 2.85e-15 | 8 |
lymphatic part of lymphoid system | 2.85e-15 | 8 |
blood vessel endothelium | 7.89e-15 | 18 |
endothelium | 7.89e-15 | 18 |
cardiovascular system endothelium | 7.89e-15 | 18 |
lymphoid system | 2.00e-12 | 10 |
simple squamous epithelium | 2.85e-12 | 22 |
squamous epithelium | 6.93e-11 | 25 |
vessel | 9.13e-11 | 68 |
vasculature | 2.01e-09 | 78 |
vascular system | 2.01e-09 | 78 |
cardiovascular system | 8.22e-07 | 109 |