FFCP PHASE1:Hg19::chr17:76480917..76480935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_at_chr17:76480917..76480935,+ | |||
|id=chr17:76480917..76480935,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.88e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.74e-10;2!CL:1000500;2.74e-10;2!CL:1000618;2.74e-10;2!CL:1001318;2.74e-10;2!CL:0002173;2.74e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.63e-10,2;CL:1000500,4.63e-10,2;CL:1000618,4.63e-10,2;CL:1001318,4.63e-10,2;CL:0002173,4.63e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.14e-29;29 | |||
|ontology_enrichment_disease=DOID:162!1.28e-10!235;DOID:14566!5.36e-10!239;DOID:305!9.53e-08!106;DOID:0050687!2.76e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3905;7.94e-09;9!DOID:1324;7.96e-08;15!DOID:0050615;2.57e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.97e-15,235;DOID:14566,2.56e-14,239;DOID:305,4.36e-12,106;DOID:0050687,3.89e-11,143;DOID:3905,4.58e-09,9;DOID:1324,5.48e-08,15;DOID:0050615,1.81e-07,16;DOID:1325,6.76e-07,7;DOID:3904,6.76e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.38e-13!9;UBERON:0001049!3.92e-12!57;UBERON:0005068!3.92e-12!57;UBERON:0006241!3.92e-12!57;UBERON:0007135!3.92e-12!57;UBERON:0002616!3.15e-10!59;UBERON:0001017!1.03e-09!82;UBERON:0000955!7.00e-09!69;UBERON:0006238!7.00e-09!69;UBERON:0005743!7.98e-09!86;UBERON:0000073!1.66e-08!94;UBERON:0001016!1.66e-08!94;UBERON:0003076!4.15e-08!15;UBERON:0003057!4.15e-08!15;UBERON:0008947!9.14e-08!38;UBERON:0003258!9.14e-08!38;UBERON:0003075!1.27e-07!86;UBERON:0007284!1.27e-07!86;UBERON:0002346!1.49e-07!90;UBERON:0002298!2.42e-07!8;UBERON:0002020!3.18e-07!34;UBERON:0003528!3.18e-07!34;UBERON:0000064!4.22e-07!219;UBERON:0001893!4.42e-07!34;UBERON:0000072!6.54e-07!46;UBERON:0002780!8.52e-07!41;UBERON:0001890!8.52e-07!41;UBERON:0006240!8.52e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.12e-41;9!UBERON:0001557;5.12e-41;9!UBERON:0000072;5.64e-19;37!UBERON:0000065;5.27e-13;44!UBERON:0003891;4.68e-11;4!UBERON:0003567;2.74e-10;2!UBERON:0003838;2.74e-10;2!UBERON:0003586;2.74e-10;2!UBERON:0005169;2.74e-10;2!UBERON:0002321;2.74e-10;2!UBERON:0005215;2.74e-10;2!UBERON:0002303;2.74e-10;2!UBERON:0002319;2.74e-10;2!UBERON:0001004;7.63e-09;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.99e-42,9;UBERON:0008947,5.64e-22,38;UBERON:0003258,5.64e-22,38;UBERON:0001557,4.13e-19,19;UBERON:0000072,3.65e-17,47;UBERON:0000065,1.55e-14,54;UBERON:0001004,3.54e-13,74;UBERON:0003891,1.10e-10,4;UBERON:0003567,4.63e-10,2;UBERON:0003838,4.63e-10,2;UBERON:0003586,4.63e-10,2;UBERON:0005169,4.63e-10,2;UBERON:0002321,4.63e-10,2;UBERON:0005215,4.63e-10,2;UBERON:0002303,4.63e-10,2;UBERON:0002319,4.63e-10,2;UBERON:0001041,3.26e-09,87;UBERON:0004921,6.81e-08,118;UBERON:0001007,1.25e-07,145;UBERON:0001555,1.25e-07,145;UBERON:0007026,1.25e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0.619737604642413,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,1.58565817968474,0.795178609928912,0.813357600086629,0.829288440122964,0.756962552626885,0.36497735907583,0,0,0,0,0,1.77460200059766,1.68584690078102,1.20505514941741,1.98529150918309,1.96091499683166,1.89816495288877,2.29213223872279,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,1.08378575017541,1.50506932156456,0,0,0.895499018888713,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,1.75368900001705,0,0,0.635020748171649,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0.687010689511529,0,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,1.77977555204936,0.472775363535873,1.03423011972439,1.16641845353302,0,0,0.120596438625408,0,0,0.295547618953547,0,1.30726156222788,0,0,0,0,0,0.108647371922008,0,0,0,1.02193298195737,0.31396051279005,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.992975867626496,0.313932918407225,0,0,0,0,0,0,0,0,0.967563312890852,1.24251839046515,1.72442459811739,0,0,0,0.137041924646751,1.58971689362392,0.126621591911757,0.391102765469606,0,0,0,0,1.94712213482057,0,0,0.124252535565433,0,0,0,0,0,0,0.821432273351958,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11683330164461,0.795229689809303,0.136203406111576,0.160753148465019,0.825236619583403,0,0,0,0.182248669974074,0,0,0,0.211200673038813,3.5857467866569,0,0,0,0,0,0,0,0,1.14929529049075,0,0,0,0,1.68067843270016,0.79339561045614,1.36869470307464,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.250381861413,0.573409195690071,0.221858103073705,0.434674820589684,0,0,0,1.7127920012698,0.235265819698172,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,1.58694147858591,0,0.489473409012935,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0.619678821295011,1.11728983594649,0,0.157723490002507,0,0,0,0,0,0,1.02558182120378,0,0.207471757392654,0,0,2.15924980702256,1.88751557356385,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0.270150338473579,0.781078098613847,0,0.507326481551255,0,0,0,0,0,0.535701835878287,0,0,0,0,6.79880526579098,0,0.475788130837822,0.131545547125698,2.00929529502746,0,0,0,1.12108865325516,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,1.9027214524411,0,2.41869136839944,0,0,0,0,0,0,3.14093547383912,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0.799529247399431,0,0,0.0802413666891683,0,0,0.716697915757256,0.315543124386369,0.203974470572744,0,0,0,0,0,0,0.655593431782173,0,0,0.534434810531121,0.827054095813604,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0.213454691755431,0,0.988077223172456,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr17:76480917..76480935,+ | |||
}} |
Revision as of 17:42, 20 January 2014
Short description: | p@chr17:76480917..76480935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76480917..76480935, + |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.63e-10 | 2 |
kidney interstitial cell | 4.63e-10 | 2 |
juxtaglomerular complex cell | 4.63e-10 | 2 |
renal interstitial pericyte | 4.63e-10 | 2 |
extraglomerular mesangial cell | 4.63e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.99e-42 | 9 |
respiratory primordium | 5.64e-22 | 38 |
endoderm of foregut | 5.64e-22 | 38 |
upper respiratory tract | 4.13e-19 | 19 |
segment of respiratory tract | 3.65e-17 | 47 |
respiratory tract | 1.55e-14 | 54 |
respiratory system | 3.54e-13 | 74 |
stroma | 1.10e-10 | 4 |
abdomen connective tissue | 4.63e-10 | 2 |
abdominal segment connective tissue | 4.63e-10 | 2 |
trunk connective tissue | 4.63e-10 | 2 |
interstitial tissue | 4.63e-10 | 2 |
extraglomerular mesangium | 4.63e-10 | 2 |
kidney interstitium | 4.63e-10 | 2 |
juxtaglomerular apparatus | 4.63e-10 | 2 |
mesangium | 4.63e-10 | 2 |
foregut | 3.26e-09 | 87 |
subdivision of digestive tract | 6.81e-08 | 118 |
digestive system | 1.25e-07 | 145 |
digestive tract | 1.25e-07 | 145 |
primitive gut | 1.25e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.97e-15 | 235 |
disease of cellular proliferation | 2.56e-14 | 239 |
carcinoma | 4.36e-12 | 106 |
cell type cancer | 3.89e-11 | 143 |
lung carcinoma | 4.58e-09 | 9 |
lung cancer | 5.48e-08 | 15 |
respiratory system cancer | 1.81e-07 | 16 |
bronchus cancer | 6.76e-07 | 7 |
bronchogenic carcinoma | 6.76e-07 | 7 |