FFCP PHASE1:Hg19::chr17:68128382..68128407,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=3773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6262 | |||
|TSSclassifier=not | |||
|UniProt=Q9NPI9 | |||
|association_with_transcript=153bp_to_AB464663,AF179353,DQ892471_5end | |||
|coexpression_cluster_id=C835 | |||
|description=CAGE_peak_10_at_KCNJ16_5end | |||
|id=chr17:68128382..68128407,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.41e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.81e-40;1!UBERON:0007123;1.33e-32;5!UBERON:0007297;5.15e-21;2!UBERON:0003918;8.13e-17;10!UBERON:0007687;8.13e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.50e-17!8;UBERON:0006947!6.98e-13!3;UBERON:0004054!6.98e-13!3;UBERON:0000476!1.41e-12!3;UBERON:0000920!1.41e-12!3;UBERON:0001896!1.68e-12!3;UBERON:0005290!1.68e-12!3;UBERON:0010096!1.68e-12!3;UBERON:0000988!3.00e-12!3;UBERON:0003124!1.22e-11!7;UBERON:0004733!1.24e-11!12;UBERON:0002028!1.24e-11!12;UBERON:0007277!1.24e-11!12;UBERON:0004732!9.43e-11!13;UBERON:0000998!1.98e-10!1;UBERON:0006868!1.98e-10!1;UBERON:0001000!3.71e-10!1;UBERON:0005352!3.71e-10!1;UBERON:0005904!6.93e-10!4;UBERON:0003076!2.42e-09!15;UBERON:0003057!2.42e-09!15;UBERON:0002046!3.36e-08!5;UBERON:0004117!3.36e-08!5;UBERON:0007689!3.36e-08!5;UBERON:0007123!3.36e-08!5;UBERON:0003091!3.36e-08!5;UBERON:0007023!2.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.81e-40;1!UBERON:0006868;1.81e-40;1!UBERON:0002046;1.33e-32;5!UBERON:0003124;1.71e-14;3!UBERON:0000920;1.71e-14;3!UBERON:0006947;1.71e-14;3!UBERON:0004054;1.71e-14;3!UBERON:0005904;3.26e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.48e-40,1;UBERON:0006868,1.48e-40,1;UBERON:0002046,1.44e-32,5;UBERON:0004117,1.44e-32,5;UBERON:0007689,1.44e-32,5;UBERON:0007123,1.44e-32,5;UBERON:0003091,1.44e-32,5;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0000920,2.09e-14,3;UBERON:0005904,3.10e-11,4;UBERON:0008814,7.42e-10,18;UBERON:0002113,4.02e-07,26;UBERON:0003918,4.02e-07,26;UBERON:0011143,4.02e-07,26;UBERON:0005095,4.02e-07,26;UBERON:0007687,4.02e-07,26;UBERON:0003124,6.39e-07,7;UBERON:0002530,7.68e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,1.46388464039779,2.22328907854041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@KCNJ16 | |||
}} |
Revision as of 17:04, 20 January 2014
Short description: | p10@KCNJ16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_KCNJ16_5end |
Coexpression cluster: | C835_kidney_thyroid_mesothelioma_throat_salivary_seminal_chorionic |
Association with transcript: | 153bp_to_AB464663, AF179353, DQ892471_5end |
EntrezGene: | KCNJ16 |
HGNC: | 6262 |
UniProt: | Q9NPI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.48e-40 | 1 |
seminal fluid secreting gland | 1.48e-40 | 1 |
thyroid gland | 1.44e-32 | 5 |
pharyngeal pouch | 1.44e-32 | 5 |
thyroid diverticulum | 1.44e-32 | 5 |
pharyngeal pouch 2 | 1.44e-32 | 5 |
thyroid primordium | 1.44e-32 | 5 |
entire pharyngeal arch endoderm | 1.88e-15 | 11 |
early pharyngeal endoderm | 1.88e-15 | 11 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
egg chorion | 2.09e-14 | 3 |
duct of male reproductive system | 3.10e-11 | 4 |
pharyngeal arch system | 7.42e-10 | 18 |
kidney | 4.02e-07 | 26 |
kidney mesenchyme | 4.02e-07 | 26 |
upper urinary tract | 4.02e-07 | 26 |
kidney rudiment | 4.02e-07 | 26 |
kidney field | 4.02e-07 | 26 |
chorion | 6.39e-07 | 7 |
gland | 7.68e-07 | 59 |