FFCP PHASE1:Hg19::chr17:61603769..61603773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr17:61603769..61603773,+ | |||
|id=chr17:61603769..61603773,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.47e-26!2;CL:0000312!3.20e-11!5;CL:0000240!1.68e-09!6;CL:0000311!1.68e-09!6;CL:0000079!1.68e-09!6;CL:0000237!1.68e-09!6;CL:0000036!1.68e-09!6;CL:0000357!1.68e-09!6;CL:0000114!1.68e-09!6;CL:0002535!1.20e-07!2;CL:0000362!2.45e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.56e-79;2!CL:0000242;1.56e-79;2!CL:0000312;1.23e-32;5!CL:0000240;2.08e-27;6!CL:0000311;2.08e-27;6!CL:0000079;2.08e-27;6!CL:0000237;2.08e-27;6!CL:0002535;6.30e-21;2!CL:0000362;1.13e-18;9!CL:0002159;2.12e-12;14!CL:0000095;2.08e-09;17!CL:0002319;6.62e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-79,2;CL:0000312,1.23e-32,5;CL:0000240,2.08e-27,6;CL:0000311,2.08e-27,6;CL:0000079,2.08e-27,6;CL:0000237,2.08e-27,6;CL:0000036,2.08e-27,6;CL:0000357,2.08e-27,6;CL:0000114,2.08e-27,6;CL:0002535,6.96e-21,2;CL:0000362,1.13e-18,9;CL:0002159,2.12e-12,14;CL:0000095,2.08e-09,17;CL:0000123,2.08e-09,17;CL:0002319,6.62e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;2.08e-27;6!CL:0000114;2.08e-27;6 | |||
|ontology_enrichment_disease=DOID:4362!5.85e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.35e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.49e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000002!2.78e-09!6;UBERON:0001560!2.78e-09!6;UBERON:0001905!1.12e-07!2;UBERON:0002757!1.12e-07!2;UBERON:0010134!1.12e-07!2;UBERON:0002784!1.12e-07!2;UBERON:0005408!1.12e-07!2;UBERON:0001899!1.12e-07!2;UBERON:0006955!1.20e-07!2;UBERON:0004801!1.20e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0006955;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0004801;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0001003;1.21e-11;15!UBERON:0007376;1.21e-11;15!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0006955,6.96e-21,2;UBERON:0004801,6.96e-21,2;UBERON:0001003,1.21e-11,15;UBERON:0007376,1.21e-11,15;UBERON:0007383,1.21e-11,15;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.83503302194451,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:61603769..61603773,+ | |||
}} |
Revision as of 16:44, 20 January 2014
Short description: | p@chr17:61603769..61603773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:61603769..61603773, + |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-79 | 2 |
keratinocyte | 1.23e-32 | 5 |
stratified squamous epithelial cell | 2.08e-27 | 6 |
keratin accumulating cell | 2.08e-27 | 6 |
stratified epithelial cell | 2.08e-27 | 6 |
keratinizing barrier epithelial cell | 2.08e-27 | 6 |
epithelial fate stem cell | 2.08e-27 | 6 |
stratified epithelial stem cell | 2.08e-27 | 6 |
surface ectodermal cell | 2.08e-27 | 6 |
epithelial cell of cervix | 6.96e-21 | 2 |
epidermal cell | 1.13e-18 | 9 |
general ecto-epithelial cell | 2.12e-12 | 14 |
neuron associated cell | 2.08e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.08e-09 | 17 |
neural cell | 6.62e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
uterine epithelium | 6.96e-21 | 2 |
cervix epithelium | 6.96e-21 | 2 |
skin epidermis | 1.21e-11 | 15 |
outer epithelium | 1.21e-11 | 15 |
enveloping layer of ectoderm | 1.21e-11 | 15 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.49e-09 | 5 |