FFCP PHASE1:Hg19::chr17:19437692..19437704,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=229bp_to_AK127534_5end | |||
|coexpression_cluster_id=C576 | |||
|description=CAGE_peak_1_at_AK127534_5end | |||
|id=chr17:19437692..19437704,- | |||
|ontology_enrichment_celltype=CL:0000181!5.36e-09!12;CL:0000417!5.36e-09!12;CL:0000668!5.36e-09!12;CL:0000414!5.36e-09!12;CL:0000412!5.36e-09!12;CL:0000182!5.36e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.53e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.70e-45,12;CL:0000223,3.01e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.51e-34;11!UBERON:0009497;4.42e-29;13!UBERON:0001041;1.15e-12;30!UBERON:0003104;3.07e-12;31!UBERON:0007297;4.02e-09;2!CL:0000223;4.42e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-23!115;UBERON:0000073!2.09e-17!94;UBERON:0001016!2.09e-17!94;UBERON:0005743!1.52e-15!86;UBERON:0001049!3.39e-15!57;UBERON:0005068!3.39e-15!57;UBERON:0006241!3.39e-15!57;UBERON:0007135!3.39e-15!57;UBERON:0001017!4.10e-15!82;UBERON:0000955!3.73e-14!69;UBERON:0006238!3.73e-14!69;UBERON:0002616!5.58e-13!59;UBERON:0003075!6.17e-12!86;UBERON:0007284!6.17e-12!86;UBERON:0002346!3.76e-11!90;UBERON:0002780!6.92e-11!41;UBERON:0001890!6.92e-11!41;UBERON:0006240!6.92e-11!41;UBERON:0003080!1.49e-10!42;UBERON:0001893!5.93e-10!34;UBERON:0002107!2.21e-09!19;UBERON:0006925!2.21e-09!19;UBERON:0008836!2.21e-09!19;UBERON:0000025!1.06e-08!194;UBERON:0002791!1.21e-08!33;UBERON:0007499!1.76e-08!25;UBERON:0002298!2.17e-08!8;UBERON:0002020!2.57e-08!34;UBERON:0003528!2.57e-08!34;UBERON:0000153!3.88e-08!129;UBERON:0007811!3.88e-08!129;UBERON:0009856!4.39e-08!26;UBERON:0004121!4.57e-08!169;UBERON:0000033!4.96e-08!123;UBERON:0005057!6.23e-08!26;UBERON:0008835!6.87e-08!22;UBERON:0003894!6.87e-08!22;UBERON:0000924!1.02e-07!173;UBERON:0006601!1.02e-07!173;UBERON:0001869!1.48e-07!32;UBERON:0009854!1.76e-07!23;UBERON:0003056!2.21e-07!61;UBERON:0002360!3.43e-07!2;UBERON:0000094!3.43e-07!2;UBERON:0007645!3.43e-07!2;UBERON:0000956!9.18e-07!25;UBERON:0000203!9.18e-07!25;UBERON:0009497!9.24e-07!25;UBERON:0000015!9.24e-07!25;UBERON:0002423!9.24e-07!25;UBERON:0006235!9.24e-07!25;UBERON:0004161!9.24e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.31e-50;19!UBERON:0006925;3.31e-50;19!UBERON:0002423;4.55e-38;25!UBERON:0002365;1.85e-29;31!UBERON:0002330;1.85e-29;31!UBERON:0002368;5.46e-26;33!UBERON:0000949;5.08e-19;43!UBERON:0001301;6.47e-17;1!UBERON:0005172;2.24e-11;52!UBERON:0005173;2.24e-11;52!UBERON:0002417;5.27e-10;58!UBERON:0000916;5.27e-10;58!UBERON:0002530;6.68e-10;57!UBERON:0001007;5.02e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-50,19;UBERON:0006925,2.64e-50,19;UBERON:0008836,2.64e-50,19;UBERON:0008835,2.14e-43,22;UBERON:0003894,2.14e-43,22;UBERON:0009854,1.71e-41,23;UBERON:0007499,3.84e-38,25;UBERON:0009497,3.84e-38,25;UBERON:0000015,3.84e-38,25;UBERON:0002423,3.84e-38,25;UBERON:0006235,3.84e-38,25;UBERON:0004161,3.84e-38,25;UBERON:0009856,1.17e-36,26;UBERON:0002365,1.12e-30,31;UBERON:0002330,1.12e-30,31;UBERON:0002368,4.05e-27,35;UBERON:0005172,4.68e-22,54;UBERON:0005173,4.68e-22,54;UBERON:0000949,5.56e-21,45;UBERON:0002417,8.81e-20,60;UBERON:0000916,8.81e-20,60;UBERON:0003929,2.15e-17,54;UBERON:0001301,6.47e-17,1;UBERON:0002530,7.18e-16,59;UBERON:0005177,1.94e-11,101;UBERON:0005911,3.03e-11,82;UBERON:0001041,1.46e-10,87;UBERON:0009569,3.11e-10,112;UBERON:0003914,9.25e-10,117;UBERON:0005256,2.52e-09,122;UBERON:0004921,1.56e-07,118;UBERON:0003104,6.76e-07,160;UBERON:0009142,6.76e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84622579341537,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,3.9313088667105,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,2.04836273998782,1.64831716762333,1.95470277177136,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.996637174564964,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,1.75862680413699,1.32506888912221,0.129282956361551,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p1@AK127534 | |||
}} |
Revision as of 14:13, 20 January 2014
Short description: | p1@AK127534 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK127534_5end |
Coexpression cluster: | C576_Hepatocyte_hepatocellular_liver_Intestinal_mature_breast_Prostate |
Association with transcript: | 229bp_to_AK127534_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.70e-45 | 12 |
endodermal cell | 3.01e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.64e-50 | 19 |
digestive gland | 2.64e-50 | 19 |
liver bud | 2.64e-50 | 19 |
hepatic diverticulum | 2.14e-43 | 22 |
liver primordium | 2.14e-43 | 22 |
digestive tract diverticulum | 1.71e-41 | 23 |
epithelial sac | 3.84e-38 | 25 |
epithelium of foregut-midgut junction | 3.84e-38 | 25 |
anatomical boundary | 3.84e-38 | 25 |
hepatobiliary system | 3.84e-38 | 25 |
foregut-midgut junction | 3.84e-38 | 25 |
septum transversum | 3.84e-38 | 25 |
sac | 1.17e-36 | 26 |
exocrine gland | 1.12e-30 | 31 |
exocrine system | 1.12e-30 | 31 |
endocrine gland | 4.05e-27 | 35 |
abdomen element | 4.68e-22 | 54 |
abdominal segment element | 4.68e-22 | 54 |
endocrine system | 5.56e-21 | 45 |
abdominal segment of trunk | 8.81e-20 | 60 |
abdomen | 8.81e-20 | 60 |
gut epithelium | 2.15e-17 | 54 |
epididymis | 6.47e-17 | 1 |
gland | 7.18e-16 | 59 |
trunk region element | 1.94e-11 | 101 |
endo-epithelium | 3.03e-11 | 82 |
foregut | 1.46e-10 | 87 |
subdivision of trunk | 3.11e-10 | 112 |
epithelial tube | 9.25e-10 | 117 |
trunk mesenchyme | 2.52e-09 | 122 |
subdivision of digestive tract | 1.56e-07 | 118 |
mesenchyme | 6.76e-07 | 160 |
entire embryonic mesenchyme | 6.76e-07 | 160 |