FFCP PHASE1:Hg19::chr16:78085184..78085211,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr16:78085184..78085211,+ | |||
|id=chr16:78085184..78085211,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.18e-13!4;CL:0002253!1.20e-07!2;CL:1000415!1.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.27e-33;4!CL:0002253;1.17e-17;2!CL:1000415;1.17e-17;2!CL:0002251;1.45e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.17e-33,4;CL:0002253,1.07e-17,2;CL:1000415,1.27e-17,2;CL:0002251,1.42e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!2.25e-29!4;DOID:1612!2.25e-29!4;DOID:299!2.00e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.21e-74;4!DOID:1612;1.21e-74;4!DOID:299;1.06e-21;25!DOID:7;6.93e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.21e-74,4;DOID:1612,1.21e-74,4;DOID:299,1.03e-21,25;DOID:7,2.02e-08,39;DOID:305,3.10e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000989!7.55e-14!1;UBERON:0008811!7.55e-14!1;UBERON:0006258!7.55e-14!1;UBERON:0005876!7.55e-14!1;UBERON:0004874!7.55e-14!1;UBERON:0001242!1.18e-13!4;UBERON:0001262!1.18e-13!4;UBERON:0004786!1.18e-13!4;UBERON:0004808!1.18e-13!4;UBERON:0001277!1.18e-13!4;UBERON:0000310!3.85e-12!10;UBERON:0003350!4.12e-11!5;UBERON:0001443!4.34e-11!11;UBERON:0000344!5.73e-10!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.27e-33;4!UBERON:0001262;1.27e-33;4!UBERON:0004786;1.27e-33;4!UBERON:0004808;1.27e-33;4!UBERON:0001277;1.27e-33;4!UBERON:0000310;1.68e-30;10!UBERON:0001443;8.12e-28;11!UBERON:0000485;9.95e-20;7!UBERON:0003929;9.95e-20;7!UBERON:0003350;2.10e-17;8!UBERON:0002110;3.06e-12;3!UBERON:0001052;1.63e-09;4!UBERON:0000160;2.65e-08;17!UBERON:0004907;7.25e-08;5!UBERON:0000344;1.45e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.17e-33,4;UBERON:0001262,1.17e-33,4;UBERON:0004786,1.17e-33,4;UBERON:0004808,1.17e-33,4;UBERON:0001277,1.17e-33,4;UBERON:0000310,1.68e-30,10;UBERON:0001443,8.12e-28,11;UBERON:0003350,2.01e-17,8;UBERON:0000485,1.31e-15,9;UBERON:0002110,3.24e-12,3;UBERON:0006242,3.24e-12,3;UBERON:0001052,1.57e-09,4;UBERON:0000160,2.61e-08,17;UBERON:0004907,7.01e-08,5;UBERON:0000344,1.42e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78045661152634,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4824527755113,6.00940313466411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0315495493013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54216797555244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:78085184..78085211,+ | |||
}} |
Revision as of 12:21, 20 January 2014
Short description: | p@chr16:78085184..78085211, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:78085184..78085211, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.17e-33 | 4 |
epithelial cell of large intestine | 1.07e-17 | 2 |
epithelial cell of gall bladder | 1.27e-17 | 2 |
epithelial cell of alimentary canal | 1.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.17e-33 | 4 |
wall of intestine | 1.17e-33 | 4 |
gastrointestinal system mucosa | 1.17e-33 | 4 |
gastrointestinal system epithelium | 1.17e-33 | 4 |
intestinal epithelium | 1.17e-33 | 4 |
breast | 1.68e-30 | 10 |
chest | 8.12e-28 | 11 |
epithelium of mucosa | 2.01e-17 | 8 |
simple columnar epithelium | 1.31e-15 | 9 |
gallbladder | 3.24e-12 | 3 |
gall bladder primordium | 3.24e-12 | 3 |
rectum | 1.57e-09 | 4 |
intestine | 2.61e-08 | 17 |
lower digestive tract | 7.01e-08 | 5 |
mucosa | 1.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.21e-74 | 4 |
breast cancer | 1.21e-74 | 4 |
adenocarcinoma | 1.03e-21 | 25 |
disease of anatomical entity | 2.02e-08 | 39 |
carcinoma | 3.10e-08 | 106 |