FFCP PHASE1:Hg19::chr16:58315098..58315102,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-490bp_to_ENST00000366168_5end | |||
|description=CAGE_peak_1_at_ENST00000366168_5end | |||
|id=chr16:58315098..58315102,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.91e-13!13;CL:0000066!3.17e-13!254;CL:0002327!7.53e-12!4;CL:0002202!1.21e-11!9;CL:0002632!1.21e-11!9;CL:0000223!6.69e-11!59;CL:0000076!2.04e-10!62;CL:0002328!5.79e-10!3;CL:0002076!8.68e-10!43;CL:0000068!1.23e-09!3;CL:0000069!1.23e-09!3;CL:0000307!1.23e-09!3;CL:0000377!1.23e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.84e-32;9!CL:0002632;2.84e-32;9!CL:0000307;2.99e-25;3!CL:0002328;1.14e-24;3!CL:0002368;1.68e-22;13!CL:0002327;8.88e-19;4!CL:0002535;2.17e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.23e-32,9;CL:0002632,2.23e-32,9;CL:0000068,2.99e-25,3;CL:0000069,2.99e-25,3;CL:0000307,2.99e-25,3;CL:0000377,2.99e-25,3;CL:0002328,7.93e-25,3;CL:0002368,1.42e-22,13;CL:0002327,1.06e-18,4;CL:0002076,8.02e-11,42;CL:0002535,2.27e-10,2;CL:0000223,7.56e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000377;2.99e-25;3 | |||
|ontology_enrichment_disease=DOID:1749!1.16e-27!14;DOID:305!2.03e-16!106;DOID:0050687!2.76e-15!143;DOID:14566!3.38e-12!239;DOID:162!4.06e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.73e-21;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.11e-21,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!4.17e-12!4;UBERON:0004785!4.17e-12!4;UBERON:0001911!7.53e-12!4;UBERON:0005333!7.53e-12!4;UBERON:0008425!7.53e-12!4;UBERON:0005311!7.53e-12!4;UBERON:0000344!7.36e-11!12;UBERON:0004815!5.79e-10!3;UBERON:0002031!5.79e-10!3;UBERON:0003729!1.12e-09!5;UBERON:0002185!1.51e-07!4;UBERON:0007196!3.50e-07!14;UBERON:0001558!3.50e-07!14;UBERON:0003100!3.60e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.14e-24;3!UBERON:0002031;1.14e-24;3!UBERON:0007196;1.45e-19;15!UBERON:0001558;1.45e-19;15!UBERON:0001911;8.88e-19;4!UBERON:0002185;3.12e-15;5!UBERON:0003126;2.07e-11;7!UBERON:0001005;2.07e-11;7!UBERON:0000485;3.66e-11;7!UBERON:0006955;2.17e-10;2!UBERON:0004801;2.17e-10;2!UBERON:0005178;6.71e-09;34!UBERON:0002224;6.71e-09;34!UBERON:0000072;4.10e-08;37!UBERON:0005181;1.36e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,7.93e-25,3;UBERON:0002031,7.93e-25,3;UBERON:0007196,1.26e-19,15;UBERON:0001558,1.26e-19,15;UBERON:0001911,1.06e-18,4;UBERON:0005333,1.06e-18,4;UBERON:0008425,1.06e-18,4;UBERON:0005311,1.06e-18,4;UBERON:0002185,2.51e-15,5;UBERON:0003126,2.07e-11,7;UBERON:0001005,2.07e-11,7;UBERON:0006955,2.27e-10,2;UBERON:0004801,2.27e-10,2;UBERON:0000076,7.59e-10,8;UBERON:0000485,6.11e-09,9;UBERON:0005178,7.39e-09,34;UBERON:0002224,7.39e-09,34;UBERON:0005181,1.30e-08,35;UBERON:0005153,4.69e-08,37;UBERON:0008947,5.91e-08,38;UBERON:0003258,5.91e-08,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0,0.384380134730212,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,2.01090682660736,4.3556393944529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,4.55173793141999,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0.41827123283581,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,2.00236175134926,0,0,0,0,0,0,0,0,0.822251547880505,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0.432164393964449,0.124252535565433,0.471388069233591,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,3.7494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,1.41563668017288,0.550285795565037,0.693153996902029,0,0,0.397832444232549,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.407016343054873,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000366168 | |||
}} |
Revision as of 11:43, 20 January 2014
Short description: | p1@ENST00000366168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000366168_5end |
Coexpression cluster: | NA |
Association with transcript: | -490bp_to_ENST00000366168_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.23e-32 | 9 |
epithelial cell of lower respiratory tract | 2.23e-32 | 9 |
duct epithelial cell | 2.99e-25 | 3 |
branched duct epithelial cell | 2.99e-25 | 3 |
tracheal epithelial cell | 2.99e-25 | 3 |
tracheoblast | 2.99e-25 | 3 |
bronchial epithelial cell | 7.93e-25 | 3 |
respiratory epithelial cell | 1.42e-22 | 13 |
mammary gland epithelial cell | 1.06e-18 | 4 |
endo-epithelial cell | 8.02e-11 | 42 |
epithelial cell of cervix | 2.27e-10 | 2 |
endodermal cell | 7.56e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 7.93e-25 | 3 |
epithelium of bronchus | 7.93e-25 | 3 |
tracheobronchial tree | 1.26e-19 | 15 |
lower respiratory tract | 1.26e-19 | 15 |
mammary gland | 1.06e-18 | 4 |
mammary bud | 1.06e-18 | 4 |
mammary ridge | 1.06e-18 | 4 |
mammary placode | 1.06e-18 | 4 |
bronchus | 2.51e-15 | 5 |
trachea | 2.07e-11 | 7 |
respiratory airway | 2.07e-11 | 7 |
uterine epithelium | 2.27e-10 | 2 |
cervix epithelium | 2.27e-10 | 2 |
external ectoderm | 7.59e-10 | 8 |
simple columnar epithelium | 6.11e-09 | 9 |
thoracic cavity element | 7.39e-09 | 34 |
thoracic cavity | 7.39e-09 | 34 |
thoracic segment organ | 1.30e-08 | 35 |
epithelial bud | 4.69e-08 | 37 |
respiratory primordium | 5.91e-08 | 38 |
endoderm of foregut | 5.91e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.11e-21 | 14 |