FFCP PHASE1:Hg19::chr16:3704849..3704860,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1773 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2956 | |||
|TSSclassifier=strong | |||
|UniProt=B4DV35 | |||
|association_with_transcript=13bp_to_ENST00000414110_5end | |||
|coexpression_cluster_id=C1363 | |||
|description=CAGE_peak_4_at_DNASE1_5end | |||
|id=chr16:3704849..3704860,+ | |||
|ontology_enrichment_celltype=CL:0000313!1.88e-08!1;CL:0002563!4.74e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.96e-12;1!CL:0002563;5.10e-12;4!CL:0000159;7.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.96e-12,1;CL:0002563,4.57e-12,4;CL:0000159,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.91e-12;1 | |||
|ontology_enrichment_disease=DOID:2152!1.88e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.96e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.96e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.21e-26!35;UBERON:0000160!1.01e-23!27;UBERON:0001052!4.01e-16!4;UBERON:0000059!9.08e-16!11;UBERON:0000007!1.93e-14!2;UBERON:0004907!5.19e-13!5;UBERON:0004921!1.27e-10!129;UBERON:0004185!1.27e-10!129;UBERON:0001007!1.43e-09!155;UBERON:0001555!1.43e-09!155;UBERON:0007026!1.43e-09!155;UBERON:0004119!1.64e-08!169;UBERON:0000925!1.64e-08!169;UBERON:0006595!1.64e-08!169;UBERON:0004911!1.88e-08!1;UBERON:0001736!2.50e-08!1;UBERON:0006298!2.50e-08!1;UBERON:0001242!4.74e-08!4;UBERON:0001262!4.74e-08!4;UBERON:0004786!4.74e-08!4;UBERON:0004808!4.74e-08!4;UBERON:0001277!4.74e-08!4;UBERON:0002108!6.15e-08!14;UBERON:0003296!1.16e-07!4;UBERON:0010133!1.16e-07!4;UBERON:0001155!1.25e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.23e-38;17!UBERON:0005409;7.20e-38;22!UBERON:0004921;7.42e-35;33!UBERON:0002108;5.57e-21;4!UBERON:0000059;2.86e-16;11!UBERON:0001555;8.35e-14;54!UBERON:0004911;1.96e-12;1!UBERON:0001736;2.91e-12;1!UBERON:0001242;5.10e-12;4!UBERON:0001262;5.10e-12;4!UBERON:0004786;5.10e-12;4!UBERON:0004808;5.10e-12;4!UBERON:0001277;5.10e-12;4!UBERON:0001052;8.39e-12;4!UBERON:0001155;1.20e-11;9!UBERON:0004907;1.26e-09;5!UBERON:0001007;3.38e-09;81!UBERON:0000922;3.75e-09;49!UBERON:0001044;3.63e-08;6!UBERON:0003293;3.63e-08;6!UBERON:0003294;3.63e-08;6!UBERON:0010047;3.63e-08;6!UBERON:0003408;3.63e-08;6!UBERON:0000167;3.63e-08;6!UBERON:0001041;1.59e-07;14!UBERON:0000485;3.05e-07;7!UBERON:0003929;3.05e-07;7!UBERON:0004909;7.61e-07;2!UBERON:0001829;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-38,17;UBERON:0005409,2.17e-33,25;UBERON:0002108,5.57e-21,4;UBERON:0000059,2.75e-16,11;UBERON:0004911,1.96e-12,1;UBERON:0001736,3.08e-12,1;UBERON:0006298,3.08e-12,1;UBERON:0001242,4.57e-12,4;UBERON:0001262,4.57e-12,4;UBERON:0004786,4.57e-12,4;UBERON:0004808,4.57e-12,4;UBERON:0001277,4.57e-12,4;UBERON:0001052,7.52e-12,4;UBERON:0004921,1.11e-11,118;UBERON:0001155,1.18e-11,9;UBERON:0004907,1.16e-09,5;UBERON:0001007,3.35e-09,145;UBERON:0001555,3.35e-09,145;UBERON:0007026,3.35e-09,145;UBERON:0004119,3.51e-08,160;UBERON:0000925,3.51e-08,160;UBERON:0006595,3.51e-08,160;UBERON:0001044,3.63e-08,6;UBERON:0003293,3.63e-08,6;UBERON:0003294,3.63e-08,6;UBERON:0010047,3.63e-08,6;UBERON:0000167,3.63e-08,6;UBERON:0004909,7.61e-07,2;UBERON:0001829,9.54e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.62528318967304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,1.83758992864123,0,0,6.5458597732471,5.49927130440263,0,0,0,0,0,0,0,0,0,0,13.308978765353,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,5.51639951094387,3.51445740504487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1008783032935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0.560544326627578,2.73947616152849,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,4.02679554472052,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,9.49242144727719,6.55678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,2.2936464170227,0,0,0,0,7.40637576721561,0,0,0,0,0,0,0,0,1.56221329209236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@DNASE1 | |||
}} |
Revision as of 02:03, 12 January 2014
Short description: | p4@DNASE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DNASE1_5end |
Coexpression cluster: | C1363_pancreas_small_gall_temporal_duodenum_colon_hepatoblastoma |
Association with transcript: | 13bp_to_ENST00000414110_5end |
EntrezGene: | DNASE1 |
HGNC: | 2956 |
UniProt: | B4DV35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.96e-12 | 1 |
intestinal epithelial cell | 4.57e-12 | 4 |
seromucus secreting cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-38 | 17 |
gastrointestinal system | 2.17e-33 | 25 |
small intestine | 5.57e-21 | 4 |
large intestine | 2.75e-16 | 11 |
epithelium of female gonad | 1.96e-12 | 1 |
submandibular gland | 3.08e-12 | 1 |
submandibular gland primordium | 3.08e-12 | 1 |
intestinal mucosa | 4.57e-12 | 4 |
wall of intestine | 4.57e-12 | 4 |
gastrointestinal system mucosa | 4.57e-12 | 4 |
gastrointestinal system epithelium | 4.57e-12 | 4 |
intestinal epithelium | 4.57e-12 | 4 |
rectum | 7.52e-12 | 4 |
subdivision of digestive tract | 1.11e-11 | 118 |
colon | 1.18e-11 | 9 |
lower digestive tract | 1.16e-09 | 5 |
digestive system | 3.35e-09 | 145 |
digestive tract | 3.35e-09 | 145 |
primitive gut | 3.35e-09 | 145 |
endoderm-derived structure | 3.51e-08 | 160 |
endoderm | 3.51e-08 | 160 |
presumptive endoderm | 3.51e-08 | 160 |
saliva-secreting gland | 3.63e-08 | 6 |
gland of oral region | 3.63e-08 | 6 |
gland of foregut | 3.63e-08 | 6 |
oral gland | 3.63e-08 | 6 |
oral cavity | 3.63e-08 | 6 |
epithelium of gonad | 7.61e-07 | 2 |
major salivary gland | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.96e-12 | 1 |