FFCP PHASE1:Hg19::chr16:810991..810994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-78bp_to_NM_013404_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_11_at_MSLN_5end | |||
|id=chr16:810991..810994,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.87e-27!254;CL:0000077!3.59e-13!19;CL:0000076!1.00e-07!62;CL:0000349!1.33e-07!3;CL:0002577!1.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;8.16e-23;3!CL:0000349;1.58e-18;19!CL:0002097;1.43e-15;2!CL:0000174;1.08e-10;3!CL:0000077;1.13e-09;19!CL:0000313;1.22e-08;1!CL:0002537;3.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.50e-23,3;CL:0000349,1.11e-18,19;CL:0002097,2.59e-15,2;CL:0000174,1.60e-10,3;CL:0000066,3.42e-10,253;CL:0000077,1.47e-09,19;CL:0000313,9.74e-09,1;CL:0002537,3.34e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.49e-24!106;DOID:0050687!2.35e-16!143;DOID:162!6.52e-12!235;DOID:14566!2.30e-11!239;DOID:299!5.14e-09!25;DOID:170!1.99e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.28e-16;2!DOID:2152;1.22e-08;1!DOID:299;2.86e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.31e-16,2;DOID:2152,9.74e-09,1;DOID:305,7.37e-08,106;DOID:299,2.86e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.23e-17!9;UBERON:0004119!2.58e-15!169;UBERON:0000925!2.58e-15!169;UBERON:0006595!2.58e-15!169;UBERON:0008947!3.87e-14!38;UBERON:0003258!3.87e-14!38;UBERON:0005631!1.02e-13!14;UBERON:0000158!1.02e-13!14;UBERON:0000077!1.33e-13!130;UBERON:0001041!2.89e-13!98;UBERON:0000065!4.02e-13!53;UBERON:0001004!5.20e-11!72;UBERON:0001007!8.55e-11!155;UBERON:0001555!8.55e-11!155;UBERON:0007026!8.55e-11!155;UBERON:0001557!1.76e-10!19;UBERON:0004921!5.75e-10!129;UBERON:0004185!5.75e-10!129;UBERON:0000072!3.13e-09!46;UBERON:0001987!8.73e-09!4;UBERON:0004340!8.73e-09!4;UBERON:0000466!3.40e-08!126;UBERON:0001048!4.39e-08!168;UBERON:0000064!5.52e-08!219;UBERON:0000305!8.32e-08!7;UBERON:0000464!1.46e-07!104;UBERON:0003124!1.58e-07!7;UBERON:0003134!3.87e-07!37;UBERON:0000474!3.87e-07!37;UBERON:0005177!4.06e-07!107;UBERON:0002294!4.31e-07!7;UBERON:0001173!4.31e-07!7;UBERON:0004912!4.31e-07!7;UBERON:0003100!4.69e-07!41;UBERON:0000478!5.40e-07!24;UBERON:0004871!9.37e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.87e-17;4!UBERON:0000478;1.66e-14;24!UBERON:0005631;2.50e-12;10!UBERON:0000158;2.50e-12;10!UBERON:0002369;1.08e-10;3!UBERON:0001235;1.08e-10;3!UBERON:0006858;1.08e-10;3!UBERON:0000305;1.97e-10;7!UBERON:0004913;5.27e-09;1!UBERON:0003703;5.27e-09;1!UBERON:0001174;5.27e-09;1!UBERON:0004914;5.27e-09;1!UBERON:0004911;1.22e-08;1!UBERON:0002394;2.06e-08;4!UBERON:0003928;2.06e-08;4!UBERON:0001851;4.59e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.28e-25,14;UBERON:0000158,1.28e-25,14;UBERON:0001987,1.84e-17,4;UBERON:0004340,1.84e-17,4;UBERON:0003124,2.31e-17,7;UBERON:0000478,1.26e-14,24;UBERON:0002369,1.60e-10,3;UBERON:0001235,1.60e-10,3;UBERON:0006858,1.60e-10,3;UBERON:0000305,2.10e-10,7;UBERON:0004871,3.66e-09,8;UBERON:0004913,6.16e-09,1;UBERON:0003703,6.16e-09,1;UBERON:0001174,6.16e-09,1;UBERON:0004914,6.16e-09,1;UBERON:0000995,8.64e-09,21;UBERON:0004911,9.74e-09,1;UBERON:0005795,2.22e-08,22;UBERON:0003975,2.22e-08,22;UBERON:0001851,5.97e-08,15;UBERON:0004175,2.39e-07,25;UBERON:0003134,8.55e-07,37;UBERON:0000474,8.55e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.337169380156203,0.482022059766964,0.882351781859152,0.871517776369625,0.949082476444386,0.943819157121151,1.37355025587742,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0.764628819135115,2.49322802678617,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,13.847180114786,0.593929361665277,14.1293922965647,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0.709163045303809,0,0,0,0,0,0,0,0,0,4.57541546779759,0,0,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.19351266257817,0.219267951258557,0.410577285266046,0,0,0,0,0,0,0.391102765469606,0.320635281006135,0.213452994739353,0.19980960958213,0.576361668616424,0,0,0,0,4.47818665771911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,1.17466153824464,0.157204305099666,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,1.34833881285112,1.07220795687463,0,1.13352962756136,0.926089897295336,0.734210113519403,0,2.16161013012681,5.04353314031026,0.530067437837643,0.771656153083659,0.168942440653073,0,0.690860683462397,0,0,0,0,0.163565394255844,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0.261906694481422,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.3746412112643,0,0,1.56597604516909,1.27595303699816,2.43835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.358611026963382,0.99798106963804,0,0.853818767021724,0,0.628776414746108,0,0.122241444182866,0,0,0,0 | |||
|short_description=p11@MSLN | |||
}} |
Revision as of 01:43, 12 January 2014
Short description: | p11@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -78bp_to_NM_013404_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.50e-23 | 3 |
extraembryonic cell | 1.11e-18 | 19 |
cortical cell of adrenal gland | 2.59e-15 | 2 |
steroid hormone secreting cell | 1.60e-10 | 3 |
epithelial cell | 3.42e-10 | 253 |
mesothelial cell | 1.47e-09 | 19 |
serous secreting cell | 9.74e-09 | 1 |
amnion mesenchymal stem cell | 3.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.28e-25 | 14 |
membranous layer | 1.28e-25 | 14 |
placenta | 1.84e-17 | 4 |
allantois | 1.84e-17 | 4 |
chorion | 2.31e-17 | 7 |
extraembryonic structure | 1.26e-14 | 24 |
adrenal gland | 1.60e-10 | 3 |
adrenal cortex | 1.60e-10 | 3 |
adrenal/interrenal gland | 1.60e-10 | 3 |
amnion | 2.10e-10 | 7 |
somatic layer of lateral plate mesoderm | 3.66e-09 | 8 |
hepatopancreatic ampulla | 6.16e-09 | 1 |
extrahepatic bile duct | 6.16e-09 | 1 |
common bile duct | 6.16e-09 | 1 |
duodenal papilla | 6.16e-09 | 1 |
uterus | 8.64e-09 | 21 |
epithelium of female gonad | 9.74e-09 | 1 |
embryonic uterus | 2.22e-08 | 22 |
internal female genitalia | 2.22e-08 | 22 |
cortex | 5.97e-08 | 15 |
internal genitalia | 2.39e-07 | 25 |
female reproductive organ | 8.55e-07 | 37 |
female reproductive system | 8.55e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.31e-16 | 2 |
ovary epithelial cancer | 9.74e-09 | 1 |
carcinoma | 7.37e-08 | 106 |
adenocarcinoma | 2.86e-07 | 25 |