FFCP PHASE1:Hg19::chr15:96875657..96875760,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7976 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000559679_5end | |||
|description=CAGE_peak_14_at_NR2F2_5end | |||
|id=chr15:96875657..96875760,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.59e-20!254;CL:0000220!5.24e-07!246;CL:0002251!7.86e-07!21;CL:0000076!8.15e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.59e-17,253;CL:0000076,2.27e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.62e-10;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.72e-21!143;DOID:305!1.65e-16!106;DOID:14566!1.17e-13!239;DOID:162!3.27e-12!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.59e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.81e-20,143;DOID:305,3.39e-16,106;DOID:14566,9.42e-15,239;DOID:162,5.13e-13,235;DOID:1749,1.46e-08,14;DOID:0050615,8.59e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.32e-17!155;UBERON:0001555!6.32e-17!155;UBERON:0007026!6.32e-17!155;UBERON:0004119!7.63e-17!169;UBERON:0000925!7.63e-17!169;UBERON:0006595!7.63e-17!169;UBERON:0000481!1.33e-13!347;UBERON:0000077!1.90e-13!130;UBERON:0003104!3.35e-13!238;UBERON:0009142!3.35e-13!238;UBERON:0004921!1.05e-12!129;UBERON:0004185!1.05e-12!129;UBERON:0001041!5.15e-12!98;UBERON:0001004!6.40e-12!72;UBERON:0000475!2.99e-09!365;UBERON:0002100!4.58e-09!216;UBERON:0000477!2.74e-08!286;UBERON:0008947!3.36e-08!38;UBERON:0003258!3.36e-08!38;UBERON:0001048!4.66e-08!168;UBERON:0009569!1.60e-07!113;UBERON:0000072!2.65e-07!46;UBERON:0000483!3.11e-07!309;UBERON:0000119!3.88e-07!312;UBERON:0000466!4.28e-07!126;UBERON:0000915!6.11e-07!52;UBERON:0000065!6.88e-07!53;UBERON:0000468!7.58e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.84e-08;9!UBERON:0001557;5.84e-08;9!UBERON:0001004;2.54e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.33e-10,74;UBERON:0001007,5.09e-09,145;UBERON:0001555,5.09e-09,145;UBERON:0007026,5.09e-09,145;UBERON:0004119,1.41e-08,160;UBERON:0000925,1.41e-08,160;UBERON:0006595,1.41e-08,160;UBERON:0001737,3.18e-08,9;UBERON:0001041,3.55e-07,87;UBERON:0008947,4.00e-07,38;UBERON:0003258,4.00e-07,38;UBERON:0000072,8.63e-07,47 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.845726424575827,1.0007329835313,1.78784437770915,1.74467704820074,0,0.631719873426831,0.261185628199839,1.47440361900905,0,0.655324116390517,0.263766978228454,1.23766352960047,0.994192127183747,1.34465029290355,0,1.46062018077475,0.975865597581014,0.123121058076788,0.816002764977012,0,0.286235987131057,0.273748850145768,0.502170558379211,0.687720651731561,0.492603536699674,0.629686250509434,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0,1.00267582127178,1.01392563272577,0,0.486634870302636,0.567208902984407,0.221729397462564,0.614843499851882,0.327447688744282,0.728590576585084,1.11235332835329,0,0,0,0,0,0,1.59009925893364,0.860234595106124,1.38856200643038,2.26123176769604,1.67799774483962,3.85165258716094,2.08994966536811,1.03366703667732,1.42306505074684,0.66944122552934,0.805658634218294,2.28081631715554,1.95249646038536,1.10298924103761,1.62028389576352,1.16089646769304,0,1.46394924628319,0,0,1.28241220751285,0,0,0.872188104285069,2.48485975847659,1.13967460498122,0.529636723252875,0,1.06400514659507,0,1.06748995729705,0.98667019366864,1.24484414159907,1.34710672069688,0.653847612453835,0.151357427644931,1.15235184896,1.64025002283658,0.312160076830321,1.1409436430889,1.34503812496621,1.05691048779388,1.94247533241758,1.40450806702248,0.204154171254893,1.22834317311768,0.723280468230358,2.37600571456411,0.989067717114227,0.910161361938026,0,1.0100166837244,1.50142223846357,0.277064115484183,1.31693286264251,0.30648779579902,1.05166641234618,1.58805056424029,0.538168907066586,0.640672166455702,0.423863802319124,0.300091096084402,0.515262646192195,0.772921620136887,0.930584281657949,0,1.36411807225678,0,0.644349290496095,0.161646056818812,0.355009592516614,0.906768884048762,0.67824236924195,2.12586938479627,1.09098448236334,2.00763216772303,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,1.28648187638577,0,1.85747171212792,2.16563844500876,5.67872640191251,5.73187946265546,4.33819853790268,8.16175398219715,5.44698610231015,3.55905928666645,3.7752766284846,4.90553662813365,1.92373578473195,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,3.9313088667105,2.95394953340702,0,0.368965315629341,0.171567810298526,0.548751427043128,1.1240175325762,2.21163739305588,1.48141512253647,1.3032332212413,2.07986957055916,0,0,0.469634776943287,0.866198686566443,0.462985512576611,1.14152491340759,1.58040879591855,1.71697232418975,0,0,0,3.74935335947108,0,0.708875486211932,2.5971971583826,1.45316969256981,0.766765358330422,0,0,0,0,0.12624243342638,1.46045156871989,3.05590740446622,0,1.71072446022705,3.18765227380303,3.60411669412701,4.57322292208925,0.560655421726804,0.43596006883328,0.4400297149257,0.517086863031111,0,0.845302752556,0.797814349754612,1.04007436911366,2.57207374262142,2.83698264046557,1.8649552531127,0.285955987316295,1.08524321078289,0,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,0,0.299918973546171,0,0,0,0.958499421966331,0,1.42636905040718,1.73737568001095,1.02738161275192,2.50685348535854,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.736148950314839,0,1.62759014219841,1.03985430765404,1.07057393278297,0.157702415033935,0.468565659970853,0,2.27407504055985,1.03473071292505,0,0.553107505625109,0.868836144680828,0,1.02943027143257,0,0,0,1.21251028578504,1.66435439510497,0.604780586659361,1.98486246255021,0.920771839728375,0,0.768834895534206,2.04682899626681,0.64341568457443,0,0.771048469013278,0.887808626565635,1.23190734020714,0.519254429183621,0.929683027679674,0.241718899183244,0.802025881213139,1.19705285616665,0.459257792658427,0.182091168006717,0.393373244878272,0,0.462092022626489,1.56869953835371,1.46139224653261,0.105551628892876,0,1.70093705276516,1.29549549661284,4.62681758070868,1.08378575017541,0.501689773854853,1.78413391131527,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,0.976135183992909,2.57602529119306,1.92295876118521,2.0627374980147,1.72279661398852,0.650060246036521,0,1.25671933779759,1.07834031980251,0.921022048356777,1.24052915236078,0.322260734604821,1.45016693914229,1.02271952899321,0.890320356467374,0.330569830721956,1.15314040419064,0.510450849978337,0.6069466851333,0.464845549297286,0.62962469366128,0,0.924100740528266,1.06461206063404,0,2.59453906745488,0.715624433709956,0,0.949138274156178,1.5250415513906,1.535386747868,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0.353437207037059,1.2130948894399,0,0.421258456238981,0.48763373908959,1.70599442741899,0,0.272999822815972,0.707027159768564,0,0.551365343546124,4.64407282668854,1.75380354101505,0.578775534266688,1.31178950409327,0.202910376962704,1.8589409885985,0,0.573645408816206,0,0.7133421029625,0,1.47775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| |||
|short_description=p14@NR2F2 | |||
}} |
Revision as of 01:27, 12 January 2014
Short description: | p14@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NR2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000559679_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.59e-17 | 253 |
squamous epithelial cell | 2.27e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.33e-10 | 74 |
digestive system | 5.09e-09 | 145 |
digestive tract | 5.09e-09 | 145 |
primitive gut | 5.09e-09 | 145 |
endoderm-derived structure | 1.41e-08 | 160 |
endoderm | 1.41e-08 | 160 |
presumptive endoderm | 1.41e-08 | 160 |
larynx | 3.18e-08 | 9 |
foregut | 3.55e-07 | 87 |
respiratory primordium | 4.00e-07 | 38 |
endoderm of foregut | 4.00e-07 | 38 |
segment of respiratory tract | 8.63e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.81e-20 | 143 |
carcinoma | 3.39e-16 | 106 |
disease of cellular proliferation | 9.42e-15 | 239 |
cancer | 5.13e-13 | 235 |
squamous cell carcinoma | 1.46e-08 | 14 |
respiratory system cancer | 8.59e-07 | 16 |