FFCP PHASE1:Hg19::chr14:24729251..24729267,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000559136_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_9_at_TGM1_5end | |||
|id=chr14:24729251..24729267,- | |||
|ontology_enrichment_celltype=CL:0000349!1.37e-18!3;CL:0002577!1.37e-18!3;CL:0002536!1.87e-12!2;CL:0002537!2.13e-11!5;CL:0002623!1.66e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;4.94e-60;3!CL:0000349;6.34e-51;19!CL:0002537;1.31e-36;5!CL:0002541;6.78e-08;3!CL:0002623;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.46e-60,3;CL:0000349,6.34e-51,19;CL:0002537,1.39e-36,5;CL:0002541,6.78e-08,3;CL:0002623,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.09e-11;2!UBERON:0010056;4.09e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.35e-40!14;UBERON:0000158!3.35e-40!14;UBERON:0001987!7.36e-24!4;UBERON:0004340!7.36e-24!4;UBERON:0000478!1.12e-22!24;UBERON:0003124!6.14e-21!7;UBERON:0000305!6.66e-21!7;UBERON:0004871!2.90e-18!8;UBERON:0004923!1.89e-14!57;UBERON:0000995!2.71e-09!21;UBERON:0005795!7.63e-09!22;UBERON:0003975!7.63e-09!22;UBERON:0004175!1.04e-07!25;UBERON:0002372!4.78e-07!1;UBERON:0001961!4.78e-07!1;UBERON:0001744!4.78e-07!1;UBERON:0001735!4.78e-07!1;UBERON:0000064!7.47e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.87e-45;4!UBERON:0000478;2.51e-40;24!UBERON:0005631;3.26e-32;10!UBERON:0000158;3.26e-32;10!UBERON:0000305;2.15e-26;7!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3!UBERON:0001723;7.76e-08;3!UBERON:0001033;7.76e-08;3!UBERON:0000077;2.74e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.55e-69,14;UBERON:0000158,4.55e-69,14;UBERON:0003124,1.41e-45,7;UBERON:0001987,2.66e-45,4;UBERON:0004340,2.66e-45,4;UBERON:0000478,2.51e-40,24;UBERON:0000305,2.25e-26,7;UBERON:0004871,3.53e-23,8;UBERON:0004923,1.33e-14,66;UBERON:0000995,3.26e-09,21;UBERON:0005795,8.03e-09,22;UBERON:0003975,8.03e-09,22;UBERON:0000920,6.78e-08,3;UBERON:0001723,7.26e-08,3;UBERON:0001033,7.26e-08,3;UBERON:0010056,7.26e-08,3;UBERON:0004175,7.84e-08,25;UBERON:0000077,7.93e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,5.75942385747893,9.98612637062982,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07229042003222,5.3453642549875,15.9723565091601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.153900517007594,0,0.23056390438806,0,0,3.19001159731919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,1.52401723527873,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@TGM1 | |||
}} |
Revision as of 19:28, 11 January 2014
Short description: | p9@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGM1_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 96bp_to_ENST00000559136_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.46e-60 | 3 |
extraembryonic cell | 6.34e-51 | 19 |
amnion mesenchymal stem cell | 1.39e-36 | 5 |
chorionic membrane mesenchymal stem cell | 6.78e-08 | 3 |
acinar cell of salivary gland | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.55e-69 | 14 |
membranous layer | 4.55e-69 | 14 |
chorion | 1.41e-45 | 7 |
placenta | 2.66e-45 | 4 |
allantois | 2.66e-45 | 4 |
extraembryonic structure | 2.51e-40 | 24 |
amnion | 2.25e-26 | 7 |
somatic layer of lateral plate mesoderm | 3.53e-23 | 8 |
organ component layer | 1.33e-14 | 66 |
uterus | 3.26e-09 | 21 |
embryonic uterus | 8.03e-09 | 22 |
internal female genitalia | 8.03e-09 | 22 |
egg chorion | 6.78e-08 | 3 |
tongue | 7.26e-08 | 3 |
gustatory system | 7.26e-08 | 3 |
future tongue | 7.26e-08 | 3 |
internal genitalia | 7.84e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 7.93e-07 | 29 |