FFCP PHASE1:Hg19::chr12:133136555..133136646,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29308 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539264,ENST00000541831_5end | |||
|description=CAGE_peak_2_at_FBRSL1_5end | |||
|id=chr12:133136555..133136646,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.05e-40!254;CL:0002321!6.67e-15!248;CL:0000220!3.01e-14!246;CL:0000076!1.15e-13!62;CL:0000223!2.24e-09!59;CL:0002076!3.90e-09!43;CL:0000082!1.11e-07!19;CL:0000012!2.79e-07!682;CL:0000548!6.43e-07!679;CL:0000004!6.43e-07!679;CL:0000255!6.43e-07!679;CL:0000071!7.32e-07!18;CL:0002546!7.32e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000082;7.55e-08;19!CL:0002076;1.16e-07;42!CL:0000076;3.14e-07;63!CL:0000071;5.78e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.63e-40,253;CL:0002321,2.99e-14,250;CL:0000076,4.99e-13,63;CL:0000223,1.02e-09,58;CL:0002076,1.16e-09,42;CL:0000082,8.41e-08,19;CL:0002078,4.06e-07,45;CL:0000071,5.73e-07,18;CL:0002546,5.73e-07,18;CL:0000115,8.37e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;5.78e-07;18 | |||
|ontology_enrichment_disease=DOID:162!4.28e-37!235;DOID:14566!4.88e-36!239;DOID:0050687!5.39e-23!143;DOID:305!4.76e-21!106;DOID:0050686!7.08e-21!137;DOID:8692!2.77e-15!31;DOID:1240!7.61e-15!39;DOID:2531!3.12e-13!51;DOID:0060083!3.12e-13!51;DOID:3095!3.78e-07!22;DOID:2994!3.78e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.33e-15;31!DOID:1240;1.25e-12;39!DOID:2531;1.20e-08;51!DOID:0060083;1.20e-08;51!DOID:3095;2.38e-07;22!DOID:2994;2.38e-07;22!DOID:0050615;7.99e-07;16!DOID:305;8.27e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.86e-37,235;DOID:14566,2.19e-36,239;DOID:0050687,5.24e-23,143;DOID:0050686,4.46e-21,137;DOID:305,5.77e-21,106;DOID:8692,1.47e-15,31;DOID:1240,2.37e-15,39;DOID:2531,1.09e-13,51;DOID:0060083,1.09e-13,51;DOID:3095,2.07e-07,22;DOID:2994,2.07e-07,22;DOID:0050615,8.83e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.03e-08!169;UBERON:0000925!1.03e-08!169;UBERON:0006595!1.03e-08!169;UBERON:0005177!1.44e-08!107;UBERON:0000487!5.82e-08!22;UBERON:0004802!1.11e-07!19;UBERON:0000115!1.11e-07!19;UBERON:0004921!3.33e-07!129;UBERON:0004185!3.33e-07!129;UBERON:0001007!5.08e-07!155;UBERON:0001555!5.08e-07!155;UBERON:0007026!5.08e-07!155;UBERON:0000077!6.57e-07!130;UBERON:0001986!7.32e-07!18;UBERON:0004638!7.32e-07!18;UBERON:0004852!7.32e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;6.56e-09;33!UBERON:0000487;4.07e-08;22!UBERON:0004807;5.75e-08;22!UBERON:0005911;6.79e-08;36!UBERON:0004802;7.55e-08;19!UBERON:0000115;7.55e-08;19!UBERON:0006554;4.00e-07;30!UBERON:0001008;4.00e-07;30!UBERON:0004638;5.78e-07;18!UBERON:0001986;5.78e-07;18!UBERON:0004852;5.78e-07;18!UBERON:0002113;8.94e-07;24!UBERON:0011143;8.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.56e-10,101;UBERON:0000487,4.33e-08,22;UBERON:0004802,8.41e-08,19;UBERON:0000115,8.41e-08,19;UBERON:0004638,5.73e-07,18;UBERON:0001986,5.73e-07,18;UBERON:0004852,5.73e-07,18 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.704772020479856,2.00146596706261,0,0,0,1.26343974685366,1.04474251279935,28.2594026976735,95.5987600122226,9.61142037372758,9.75937819445278,0.618831764800233,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,1.46379839637152,8.61847406537515,7.14002419354885,6.89600387251793,3.72106783270374,6.43309797842556,12.3031786802907,10.5450499932173,11.4940825229924,11.5704848531108,0,0.767658796194425,0.464448369948228,24.824373060931,21.686826152034,15.5296684270051,11.7750144882058,9.2410001116824,18.2032272387605,1.10799081706375,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0,0.521482918420201,0,1.81619850790011,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.365328307529268,5.27988733383968,3.82297027883492,0.889509253863555,2.98711155796555,4.40435585739614,2.29900975981793,2.64417949113945,1.90810750907073,11.384259382189,15.2681669236444,20.6427543187624,5.28685314316103,6.72610275577843,16.0664291712797,0.393419540227666,0,0.205601498999509,1.00311897234407,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.780356085359269,1.47994114143309,0.829050053357545,0.579606171470105,0.14828656316206,0.267540828089713,0,0.566546713487831,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,1.34140171940727,1.79007586580942,1.0843174571537,1.50401373190767,0.579386075843295,3.1811437882044,0,5.76662384700814,6.43015252641436,12.2090352113445,1.96468613246569,37.1581194058393,21.8762821242813,0,0.348259474598534,0.132957960518865,5.96226560763355,3.43196946468077,7.4291500265913,13.1183188862025,13.763753521698,24.9941161157468,18.6551620834923,13.8434813949269,23.3850335649057,19.6455268544602,9.56142008926517,7.82685777910763,8.03329470635209,7.65375702507379,13.6848979029332,15.3759096255347,15.0741862941806,19.4434067491622,12.7698611446234,15.0434679659534,20.8331238894146,36.795992991812,29.427235446612,19.2361831126928,0,0,22.6768907114118,0.993943903390637,1.51956613997496,2.25095607382472,1.14734648299525,1.77334191099179,3.36406560085384,7.47242970107935,11.3467072271894,1.55605517699883,2.02066008104532,3.92308567472301,1.66493170409425,0,10.5444644325208,8.42832207441865,10.8389646093445,5.38015249986484,11.0388428725139,8.7411389958791,11.3765153428821,2.24569588380383,9.9495797022532,1.34323515528495,3.56400857184616,0,6.37112953356618,2.15585442544872,11.1101835209684,17.0161187025871,7.20366700258876,2.19488810440419,0.919463387397059,0.600952235626387,4.99101605904093,0.358779271377724,1.06778694409284,0.423863802319124,2.10063767259082,0.309157587715317,1.03056216018252,0,2.86919764810153,0.487185025805993,0.504867548488229,0.920498986422993,0.80823028409406,0.355009592516614,0.604512589365842,1.3564847384839,7.34391242020528,8.45512973831587,12.6194021971162,27.444083879159,24.5180071394748,24.6331158883379,20.6285499480587,29.0168978506973,14.5990943630332,1.56449532329816,1.92972281457866,0,1.39310378409594,0.721879481669586,6.27026040211173,10.2836660947642,9.3994301654558,8.71322384585912,11.5476105368975,9.96536600266606,5.79774625088707,6.47530834913642,5.38646019724947,5.16708818237254,25.2435192846202,6.173610169971,8.82052268313252,0,2.94848165003288,1.77236972004421,4.85609409356116,16.1114854491479,7.54898365313512,31.1690810560497,25.8524032492525,17.3915122272121,13.2401476576697,5.86454949558584,5.19967392639789,10.1031939417691,5.68058984377876,4.81375646366869,5.19719211939866,3.24089858803628,6.27838702374174,18.1747011530633,18.0282094039923,0,0.468008530278475,0,6.56136837907439,5.03946384596579,10.7749073904214,5.3735113621709,5.52204483176528,16.8688378832693,0.492663237895943,0,0.829312462163088,0.288239906833923,2.01987893482208,1.07946420296687,1.52795370223311,1.17217447210047,1.71072446022705,5.44985711327615,3.30377363628309,4.0015700568281,10.4281908441185,6.10344096366592,6.1604160089598,2.71470603091333,3.57656445851882,0.845302752556,1.59562869950922,3.12022310734098,5.14414748524284,9.92943924162948,9.85762062359568,1.57275793023962,1.62786481617433,4.11620168390384,1.30294473717494,1.42156779497018,10.2953743481346,1.20575750823834,0.871533458600294,1.49959486773086,0,0,0,3.11512312139057,1.14861935834114,1.42636905040718,3.04040744001916,2.4657158706046,2.68591444859843,0.112085143993527,0.394061520403854,0.431255149719035,0.513372145118994,8.89331184778622,22.1237751557957,11.5993321916654,14.5739150840883,15.9484687913291,0,0,0,0.981531933753119,2.00068208423871,2.44138521329762,1.24782516918484,0.535286966391485,0.473107245101804,1.99140405487612,1.50473049863859,0,2.0694614258501,6.64225598535437,2.39679919104214,1.21637060255316,5.09083009403126,4.46086450954113,2.27444828735176,0.862856803274467,1.28073069364133,5.45629628603267,13.3148351608398,5.74541557326393,0.248107807818777,0.61384789315225,0,0.128139149255701,0,0.482561763430822,0,1.23367755042124,0.710246901252508,0.739144404124282,0.519254429183621,0.581051892299796,25.7430627630155,12.0303882181971,34.4382898620252,1.7222167224691,2.91345868810747,0.917870904715969,42.4127636132967,13.8627606787947,54.9044838423799,30.6892371771847,10.0274047448232,7.96133688496276,13.2673090115682,9.28438439239199,26.2186329573492,11.6506968143857,19.5659011803393,23.1937408470985,14.1282921517883,23.0590997363844,1.75407901316748,1.3071772551245,12.5660561307031,26.8972009473759,12.6897573919078,1.03041011647722,22.9839356694042,16.9969569836411,48.2383051916785,26.6524700874974,3.21367859688319,11.2138033218861,4.77550713055398,5.37262861541453,8.1323577765873,1.50388342815583,3.19036726611303,9.97151540768381,6.6774026735053,9.58652509093673,17.4892961302247,28.5852475987868,25.0871296521764,0.464845549297286,0.94443704049192,0.6970372701606,3.69640296211307,3.72614221221915,0.869932992075073,2.40921484835096,0.429374660225974,1.116475108079,4.42931194606216,1.71567174531442,18.1687431831047,1.28381696410176,1.90921948755562,5.49464048139461,2.15846949099978,1.92175920815238,3.41655966802491,4.24583211303964,3.17020642346017,5.05510147486777,16.5795471290461,0.487426979262569,2.11300293513511,1.09199929126389,1.97967604735198,1.13008116620243,2.2054613741845,1.32687795048244,0.876901770507525,10.4179596168004,2.62357900818653,5.0727594240676,6.8161169581945,6.19730325570931,4.7325746227337,4.02821068153797,4.63672366925625,0.709522128141196,0.422215270595328,0,22.7683904259429,14.6972582502893,15.0106495851799,15.4169523373231,25.0449265181042,0.753150406214233,10.7626343167807,11.7930032967338,11.9726141454902,4.59446800413919,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0.79312517629427,15.7031384557386,18.2871172500038,35.7758715332306,31.7723429464979,63.1899152836828,0,22.1602519093063,40.9137711437274,14.5544081300599,51.0133334364558,17.8542067151006,33.9764585517285,32.4093244227133,57.9715614360186,122.810893774133,32.1654377823046,26.175856241903,25.628562813263,20.866465646826,13.0532031007191,19.0489273871244,16.3283558761464,16.1843667460551,22.4696309712346,11.6930593036002,34.4644717053595,35.1592382018778,73.6089049275182,71.9033725948033,15.9069459346987,0.73254089635947,14.4419020881921,1.78309414843965,21.0260748636746,8.59480145055684,1.78178808499583,4.60741053148848,1.9882952955326,3.09472716103128,1.44701316529778,11.3714673216464,17.9456596908794,0.597743964753209,7.73594963487214,12.5966373927138,2.86352311006033,2.8309505256046,1.55519793830904,13.8397260766883,12.7105034019682,12.7893092556718,1.08507746200627,0,0,0,1.39152147242777,21.9575177801314,25.5219205863529,29.1241799987332,1.44999915086959,41.4208151759219,34.0699891392307,14.89242395138,14.4792216761415,24.7863921375766,12.1537496453305,0,0.844175070377856,9.15490417902499,17.0292060294086,3.54657142744257,1.75508317723178,6.6452462746584,3.90386483980089,1.30815439456455,0.797594390929008,38.9652998415822,35.5440271862698,12.4944477710309,3.82801391678303,5.03786763710243,9.59462596833542,29.6360564767636,34.0647156377204,14.7928396891139,20.5292051161634,22.7432539808578,23.8306653505697,33.0171494940082,35.7607302705852,6.11894387131278,6.69254513452506,15.2661317148656,53.2316053765544,4.97630965539252,2.83064206410685,6.11030144933625,6.52346483097368,14.0862890399013,13.1571656376874,1.01101699471016,0.802577647298789,0.468528891450678,77.1783758382267,15.4575048956351,19.4224303627274,0,2.41981432097328,20.8129477908733,1.0741718536843,8.56843490662608,19.3896917912852,15.9516929449724,23.1694369112849,21.9753042885058,20.310313061403,13.3766486634003,8.87517907284087,16.8352946185077,12.445034471626,20.545972752975,0.698906672968121,2.40780445460263,20.1253169081297,14.9102206855819,22.3354043184729,2.90967049465258,44.5693439792076,1.58186518546373,9.31885087597906,6.95501140960464,1.01297273529406,7.62650392665732,2.72539988855215,2.34798294213288,7.59276516412095,35.5903330370642,13.7443915399099,9.95250987599394,27.0823020217721,10.1887079163655,10.1348434885222,10.7364322798155,10.8786960164827,4.58991979363448,10.4022212364547,0.600420288709789,2.73810757783986,54.9310328687981,7.73577794555923,25.7629607193728,0.279282401272254,0.229160424011684,2.87149209830726,2.79550600698588,0,0.89268582976749,1.2764859772478,0.360299883542404,51.2582177920797,12.7628755337702,12.4447946155561,13.9525335778163,4.0355267421047,11.8542664892098,1.59045937961861,3.81369537112412,13.1817581741316,17.6050478844459,11.6323294648172,0.449947783103001,0.77380195455795,1.88323625639876,7.37956312718385,1.73372556058236,9.91391715751464,13.9392444205617,11.6536770566349,20.3430109158612,0,0,32.546372819808,1.62899880526114,2.5926644736038,1.30634944043764,5.98650957812437,25.6128664737938,1.02232813071253,5.43898039296603,0.293104467356165,1.32506888912221,1.93924434542326,2.11572162788304,2.22412889249628,26.7829708480335,0.961086713109252,3.61569901729232,0.414239055347196,1.48849806543585,8.69491180350955,3.89736314818867,62.5574432614778,0,0,0.612691153526923,0,41.3052273138116,1.77213635993397,1.46431517882356,2.3786276834235,1.72022758707021,1.99672292766334,0.869349641179368,63.9170693405386,15.9974922191496,0.303298235083296,7.99302933925909,0.235265819698172,18.2650613264684,22.4627594346779,0.298509605773748,0.233713309847224,0.554805861502613,0.757612021100357,0.251567901752575,1.77962244319307,0.915360273587694,0.756154618816195,1.70980920641059,1.33069634990671,1.75226443880073,1.34940933649081,2.48420731002015,0.414706207840855,0.265841714557995,1.5652351854352,0.601030435988874,1.90402606084398,0.406870733204662,0.545545977607678,1.07410557042488,0,2.3885753321917,0.400027764663154,0.343395705182793,2.02049693259551,3.78554694685953,29.6634538827247,7.29101410674747,15.6596575179127,3.85400073370863,2.31522474323834,11.502625111804,6.62628712001503,14.2048665694047,8.33279388399087,9.01114644323993,8.29530364564934,2.70307905044916,18.7056308569201,11.7446316188608,6.68491903590241,4.70078682915885,0.194860308839388,0.531459361253452,0.327130788511688,1.96565909307848,3.93236654005951,20.7085880891455,3.19979833367888,10.0290225912492,4.64980445084202,3.97261167496785,0,14.2677097873833,11.8194679406265,37.9846282771845,32.4552682304012,25.4770825806552,21.2958794474427,21.7257638341152,14.6676694870161,14.5004844183033,40.2224340940735,1.90802610392051,74.0511785561769,17.6125564622803,1.05802783107205,1.2249819094128,1.02766760154335,4.25089728976755,2.71377560397157,0.82046545696302,20.6698790901809,0.899044282034833,0.968853873791107,0,22.6721229737369,27.9588244334145,8.07085833495388,25.5311722192247,0.381382095467167,24.8529573381636,37.7940822020922,2.70757182057326,4.84092164888448,10.1596821460302,27.7621096150308,3.76675410273223,16.1163133976579,1.08060135389431,1.56215619722769,2.48024155801421,1.07806877329642,22.425967169747,0,0.992422356778588,7.73833475182331,7.41022080309653,1.07140367175657,4.03540466662589,2.42786241694653,8.19583888864671,1.1531308121143,2.88084968889448,0.685952037749674,1.08751572762931,1.05236437700559,5.79149820331444,15.5723962648897,1.33438257845874,0.942693539496011,38.9578307006167,9.13158720509496,5.18226218924691,1.9110067515482,0.643288897589907,33.0248448521399,9.29931402945002,47.9848831555119,1.60342272946051,7.45978190986933,4.0972434502548,5.53007729451273,0.430227358820278,2.721636016803,2.72682895229305,0.423387050190929,8.01874039904175,0.31020638566432,0.955538938977433,26.6215927678746,20.611549059201,18.6534425222872,1.29485767437579,0.923965261706223,9.27851545070559,1.45713297917742,33.219403811619,7.75908023129336,14.2704108933082,40.6605895340256,54.9702583727146,26.5694604677345,2.62392137567012,4.37119121007915,22.5752302253531,0.735444965261716,17.4400644855203,1.17785080268967,0.594092800654172,3.3812458206672,1.35941691750254,4.13529239111356,7.99277810872357,0.0999411559249289,6.07083391259236,1.41157948686277,32.1767880423565,5.84269110597214,2.2936464170227,0.860037498908708,7.25749186088649,1.22384682343646,25.7446907300823,7.40637576721561,0.743990036333503,0,0.865253124247578,11.8596439344974,11.8006817720791,13.1766441051894,39.3676882804049,39.548175979303,17.0005564139463,25.8228765471146,1.51557396436479,2.67964130156179,4.1458471972939,1.86179392551411,1.27940389140589,3.80903090341985,10.592581213105,6.95236800113608,6.27938430451435,0.954707374172474,1.0105859447911,6.09606894111492,2.39563310759697,3.56965880977314,4.08816570738255,0.99798106963804,33.7823564735544,16.3292839192905,0,9.88077223172456,4.69281884806909,1.4668973301944,7.32413120968329,0.665756774185513,2.81783311027437,4.48795889224526 | |||
|short_description=p2@FBRSL1 | |||
}} |
Revision as of 16:47, 11 January 2014
Short description: | p2@FBRSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FBRSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539264, ENST00000541831_5end |
EntrezGene: | FBRSL1 |
HGNC: | 29308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.63e-40 | 253 |
embryonic cell | 2.99e-14 | 250 |
squamous epithelial cell | 4.99e-13 | 63 |
endodermal cell | 1.02e-09 | 58 |
endo-epithelial cell | 1.16e-09 | 42 |
epithelial cell of lung | 8.41e-08 | 19 |
meso-epithelial cell | 4.06e-07 | 45 |
blood vessel endothelial cell | 5.73e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.73e-07 | 18 |
endothelial cell | 8.37e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.56e-10 | 101 |
simple squamous epithelium | 4.33e-08 | 22 |
respiratory tract epithelium | 8.41e-08 | 19 |
lung epithelium | 8.41e-08 | 19 |
blood vessel endothelium | 5.73e-07 | 18 |
endothelium | 5.73e-07 | 18 |
cardiovascular system endothelium | 5.73e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.86e-37 | 235 |
disease of cellular proliferation | 2.19e-36 | 239 |
cell type cancer | 5.24e-23 | 143 |
organ system cancer | 4.46e-21 | 137 |
carcinoma | 5.77e-21 | 106 |
myeloid leukemia | 1.47e-15 | 31 |
leukemia | 2.37e-15 | 39 |
hematologic cancer | 1.09e-13 | 51 |
immune system cancer | 1.09e-13 | 51 |
germ cell and embryonal cancer | 2.07e-07 | 22 |
germ cell cancer | 2.07e-07 | 22 |
respiratory system cancer | 8.83e-07 | 16 |