FFCP PHASE1:Hg19::chr12:95945132..95945163,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0E7 | |||
|association_with_transcript=99bp_to_NM_032147,uc001teh.2_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_USP44_5end | |||
|id=chr12:95945132..95945163,- | |||
|ontology_enrichment_celltype=CL:0002322!2.50e-41!5;CL:0000039!1.26e-18!7;CL:0000586!1.26e-18!7;CL:0000540!4.62e-13!6;CL:0000031!4.62e-13!6;CL:0000404!4.62e-13!6;CL:0000047!6.36e-10!8;CL:0000148!5.72e-08!10;CL:0000541!5.72e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.26e-63;5!CL:0000039;3.51e-28;7!CL:0000586;3.51e-28;7!CL:0002321;4.98e-21;15!CL:0000540;1.42e-19;6!CL:0000404;1.42e-19;6!CL:0000148;6.62e-12;10!CL:0000147;1.16e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.80e-63,5;CL:0000039,3.51e-28,7;CL:0000586,3.51e-28,7;CL:0000540,1.42e-19,6;CL:0000031,1.42e-19,6;CL:0000404,1.42e-19,6;CL:0000047,7.64e-15,8;CL:0000148,6.74e-12,10;CL:0000541,6.74e-12,10;CL:0000147,1.18e-08,14;CL:0000133,4.29e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.69e-30;10!UBERON:0005564;1.69e-30;10!CL:0000031;1.42e-19;6 | |||
|ontology_enrichment_disease=DOID:3095!1.03e-12!22;DOID:2994!1.03e-12!22;DOID:3371!2.55e-09!1;DOID:4549!2.55e-09!1;DOID:5861!2.55e-09!1;DOID:6496!2.55e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.09e-19;22!DOID:2994;1.09e-19;22!DOID:3371;1.83e-13;1!DOID:4549;1.83e-13;1!DOID:5861;1.83e-13;1!DOID:6496;1.83e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.07e-19,22;DOID:2994,1.07e-19,22;DOID:3371,1.83e-13,1;DOID:4549,1.83e-13,1;DOID:5861,1.83e-13,1;DOID:6496,1.83e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.10e-25!8;UBERON:0003135!4.93e-18!11;UBERON:0000991!2.85e-13!21;UBERON:0009196!2.85e-13!21;UBERON:0009117!2.85e-13!21;UBERON:0005564!2.85e-13!21;UBERON:0004176!1.20e-12!22;UBERON:0003101!6.05e-09!22;UBERON:0000079!6.05e-09!22;UBERON:0003133!2.24e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.03e-24;8!UBERON:0003135;4.47e-18;11!UBERON:0000991;1.48e-14;21!UBERON:0000922;2.30e-12;49!UBERON:0003101;3.54e-09;22!UBERON:0000079;3.54e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.03e-24,8;UBERON:0003135,4.47e-18,11;UBERON:0000991,1.45e-14,21;UBERON:0009196,1.45e-14,21;UBERON:0009117,1.45e-14,21;UBERON:0005564,1.45e-14,21;UBERON:0004176,6.68e-14,22;UBERON:0003101,3.54e-09,22;UBERON:0000079,3.54e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.080006663397,32.9999123120498,30.4428130318138,10.6770886665832,24.9797642366872,25.9133924943839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,3.88326957442601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,21.7016750427776,28.3331239390302,33.650667380364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.69615191493981,4.69841959443891,0,5.20143031684107,10.955913615888,1.47031839255752,7.52122617877125,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@USP44 | |||
}} |
Revision as of 15:18, 11 January 2014
Short description: | p2@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP44_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 99bp_to_NM_032147, uc001teh.2_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | Q9H0E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.80e-63 | 5 |
germ line cell | 3.51e-28 | 7 |
germ cell | 3.51e-28 | 7 |
neuron | 1.42e-19 | 6 |
neuroblast | 1.42e-19 | 6 |
electrically signaling cell | 1.42e-19 | 6 |
neuronal stem cell | 7.64e-15 | 8 |
melanocyte | 6.74e-12 | 10 |
melanoblast | 6.74e-12 | 10 |
pigment cell | 1.18e-08 | 14 |
neurectodermal cell | 4.29e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.03e-24 | 8 |
male reproductive organ | 4.47e-18 | 11 |
gonad | 1.45e-14 | 21 |
indifferent external genitalia | 1.45e-14 | 21 |
indifferent gonad | 1.45e-14 | 21 |
gonad primordium | 1.45e-14 | 21 |
external genitalia | 6.68e-14 | 22 |
male organism | 3.54e-09 | 22 |
male reproductive system | 3.54e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.07e-19 | 22 |
germ cell cancer | 1.07e-19 | 22 |
chondrosarcoma | 1.83e-13 | 1 |
extraosseous chondrosarcoma | 1.83e-13 | 1 |
myxoid chondrosarcoma | 1.83e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.83e-13 | 1 |