FFCP PHASE1:Hg19::chr12:69198683..69198711,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_at_chr12:69198683..69198711,+ | |||
|id=chr12:69198683..69198711,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.64e-21!12;CL:0000417!2.64e-21!12;CL:0000668!2.64e-21!12;CL:0000414!2.64e-21!12;CL:0000412!2.64e-21!12;CL:0000182!2.64e-21!12;CL:0002322!5.28e-10!5;CL:0000039!3.27e-07!7;CL:0000586!3.27e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-42;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.94e-42,12;CL:0000223,1.30e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.89e-32;11!UBERON:0009497;3.89e-27;13!UBERON:0001041;8.47e-12;30!UBERON:0003104;2.13e-11;31 | |||
|ontology_enrichment_disease=DOID:6193!9.67e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.95e-15;1!DOID:3350;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.38e-15,1;DOID:3350,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!5.54e-27!26;UBERON:0002107!1.48e-21!19;UBERON:0006925!1.48e-21!19;UBERON:0008836!1.48e-21!19;UBERON:0008835!2.13e-18!22;UBERON:0003894!2.13e-18!22;UBERON:0009854!1.57e-17!23;UBERON:0002368!2.75e-16!35;UBERON:0007499!5.34e-16!25;UBERON:0009497!5.34e-16!25;UBERON:0000015!5.34e-16!25;UBERON:0002423!5.34e-16!25;UBERON:0006235!5.34e-16!25;UBERON:0004161!5.34e-16!25;UBERON:0009856!2.54e-15!26;UBERON:0002365!1.36e-12!31;UBERON:0002330!1.36e-12!31;UBERON:0000949!3.49e-12!45;UBERON:0003929!1.02e-11!54;UBERON:0005172!1.40e-09!55;UBERON:0005173!1.40e-09!55;UBERON:0002530!8.70e-09!59;UBERON:0002417!1.98e-08!61;UBERON:0000916!1.98e-08!61;UBERON:0004177!4.91e-07!7;UBERON:0005911!6.55e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.16e-47;19!UBERON:0006925;6.16e-47;19!UBERON:0002423;1.47e-35;25!UBERON:0002365;1.67e-27;31!UBERON:0002330;1.67e-27;31!UBERON:0002368;2.87e-24;33!UBERON:0000949;8.90e-18;43!UBERON:0005172;1.19e-10;52!UBERON:0005173;1.19e-10;52!UBERON:0002417;2.21e-09;58!UBERON:0000916;2.21e-09;58!UBERON:0002530;2.76e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.97e-47,19;UBERON:0006925,5.97e-47,19;UBERON:0008836,5.97e-47,19;UBERON:0008835,1.74e-40,22;UBERON:0003894,1.74e-40,22;UBERON:0009854,1.05e-38,23;UBERON:0007499,1.43e-35,25;UBERON:0009497,1.43e-35,25;UBERON:0000015,1.43e-35,25;UBERON:0002423,1.43e-35,25;UBERON:0006235,1.43e-35,25;UBERON:0004161,1.43e-35,25;UBERON:0009856,3.50e-34,26;UBERON:0002365,1.38e-28,31;UBERON:0002330,1.38e-28,31;UBERON:0002368,2.96e-25,35;UBERON:0000949,1.64e-19,45;UBERON:0003929,3.74e-16,54;UBERON:0005172,3.74e-16,54;UBERON:0005173,3.74e-16,54;UBERON:0002530,9.95e-15,59;UBERON:0002417,1.80e-14,60;UBERON:0000916,1.80e-14,60;UBERON:0005911,2.12e-10,82;UBERON:0001041,9.25e-10,87;UBERON:0005177,2.65e-08,101;UBERON:0009569,2.07e-07,112;UBERON:0003914,4.64e-07,117;UBERON:0004921,6.29e-07,118;UBERON:0005256,9.74e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,5.89696330006576,4.13552934676983,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4915837338065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,4.6482077561262,3.79112948553366,6.60554729771012,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1471355855427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,1.14028650910293,0.101988829741982,0,1.19463369395298,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:69198683..69198711,+ | |||
}} |
Revision as of 14:32, 11 January 2014
Short description: | p@chr12:69198683..69198711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69198683..69198711, + |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.94e-42 | 12 |
endodermal cell | 1.30e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.97e-47 | 19 |
digestive gland | 5.97e-47 | 19 |
liver bud | 5.97e-47 | 19 |
hepatic diverticulum | 1.74e-40 | 22 |
liver primordium | 1.74e-40 | 22 |
digestive tract diverticulum | 1.05e-38 | 23 |
epithelial sac | 1.43e-35 | 25 |
epithelium of foregut-midgut junction | 1.43e-35 | 25 |
anatomical boundary | 1.43e-35 | 25 |
hepatobiliary system | 1.43e-35 | 25 |
foregut-midgut junction | 1.43e-35 | 25 |
septum transversum | 1.43e-35 | 25 |
sac | 3.50e-34 | 26 |
exocrine gland | 1.38e-28 | 31 |
exocrine system | 1.38e-28 | 31 |
endocrine gland | 2.96e-25 | 35 |
endocrine system | 1.64e-19 | 45 |
gut epithelium | 3.74e-16 | 54 |
abdomen element | 3.74e-16 | 54 |
abdominal segment element | 3.74e-16 | 54 |
gland | 9.95e-15 | 59 |
abdominal segment of trunk | 1.80e-14 | 60 |
abdomen | 1.80e-14 | 60 |
endo-epithelium | 2.12e-10 | 82 |
foregut | 9.25e-10 | 87 |
trunk region element | 2.65e-08 | 101 |
subdivision of trunk | 2.07e-07 | 112 |
epithelial tube | 4.64e-07 | 117 |
subdivision of digestive tract | 6.29e-07 | 118 |
trunk mesenchyme | 9.74e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.38e-15 | 1 |
mesenchymal cell neoplasm | 2.48e-08 | 2 |