FFCP PHASE1:Hg19::chr12:57443845..57443858,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7595 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=31bp_to_uc001smw.3_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_MYO1A_5end | |||
|id=chr12:57443845..57443858,- | |||
|ontology_enrichment_celltype=CL:0002563!1.39e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.21e-16;1!UBERON:0001045;2.25e-16;1 | |||
|ontology_enrichment_disease=DOID:3119!7.88e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.02e-25!35;UBERON:0000160!8.99e-23!27;UBERON:0000059!1.40e-15!11;UBERON:0004907!7.09e-13!5;UBERON:0001155!1.48e-12!9;UBERON:0003076!4.15e-11!15;UBERON:0003057!4.15e-11!15;UBERON:0002240!4.38e-10!3;UBERON:0004921!4.66e-10!129;UBERON:0004185!4.66e-10!129;UBERON:0001896!5.74e-10!3;UBERON:0005290!5.74e-10!3;UBERON:0010096!5.74e-10!3;UBERON:0001007!4.31e-09!155;UBERON:0001555!4.31e-09!155;UBERON:0007026!4.31e-09!155;UBERON:0001154!3.11e-08!1;UBERON:0001153!3.11e-08!1;UBERON:0002298!4.24e-08!8;UBERON:0004119!4.54e-08!169;UBERON:0000925!4.54e-08!169;UBERON:0006595!4.54e-08!169;UBERON:0001052!9.97e-08!4;UBERON:0002336!1.14e-07!1;UBERON:0001018!1.14e-07!1;UBERON:0002473!1.14e-07!1;UBERON:0005340!1.14e-07!1;UBERON:0002316!1.14e-07!1;UBERON:0003544!1.14e-07!1;UBERON:0001020!1.14e-07!1;UBERON:0005970!1.14e-07!1;UBERON:0002437!1.14e-07!1;UBERON:0002581!1.21e-07!1;UBERON:0001242!1.39e-07!4;UBERON:0001262!1.39e-07!4;UBERON:0004786!1.39e-07!4;UBERON:0004808!1.39e-07!4;UBERON:0001277!1.39e-07!4;UBERON:0002108!1.52e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.74e-41;17!UBERON:0005409;2.91e-32;22!UBERON:0002108;1.32e-28;4!UBERON:0000059;1.68e-22;11!UBERON:0004921;4.94e-18;33!UBERON:0001154;2.25e-16;1!UBERON:0001153;2.25e-16;1!UBERON:0009854;2.25e-16;1!UBERON:0001155;5.43e-16;9!UBERON:0004907;5.27e-13;5!UBERON:0001555;3.64e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.74e-41,17;UBERON:0002108,1.32e-28,4;UBERON:0005409,1.65e-28,25;UBERON:0000059,1.68e-22,11;UBERON:0001154,1.93e-16,1;UBERON:0001153,1.93e-16,1;UBERON:0001045,1.93e-16,1;UBERON:0001155,5.16e-16,9;UBERON:0004907,5.27e-13,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,5.97157158647103,30.783232447162,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56143593687223,0,0.72045208577053,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,1.36612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.0657727735628491,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09726132484042,0,0,0,0,0,0,0,0,0,0,73.6241468349792,11.3650971462058,0,0,0,2.1593931382644,0.891139200981258,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,9.52248312927721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p3@MYO1A | |||
}} |
Revision as of 14:06, 11 January 2014
Short description: | p3@MYO1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYO1A_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 31bp_to_uc001smw.3_5end |
EntrezGene: | MYO1A |
HGNC: | 7595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.74e-41 | 17 |
small intestine | 1.32e-28 | 4 |
gastrointestinal system | 1.65e-28 | 25 |
large intestine | 1.68e-22 | 11 |
vermiform appendix | 1.93e-16 | 1 |
caecum | 1.93e-16 | 1 |
midgut | 1.93e-16 | 1 |
colon | 5.16e-16 | 9 |
lower digestive tract | 5.27e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.74e-09 | 2 |