FFCP PHASE1:Hg19::chr12:56418637..56418648,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=64375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13179 | |||
|TSSclassifier=not | |||
|UniProt=Q9H2S9 | |||
|association_with_transcript=113bp_to_ENST00000551124,uc001sje.1_5end | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_9_at_IKZF4_5end | |||
|id=chr12:56418637..56418648,+ | |||
|ontology_enrichment_celltype=CL:0000624!5.55e-23!6;CL:0000791!3.19e-18!18;CL:0000789!3.19e-18!18;CL:0002420!3.19e-18!18;CL:0002419!3.19e-18!18;CL:0000790!3.19e-18!18;CL:0000084!8.75e-13!25;CL:0000827!8.75e-13!25;CL:0000815!9.14e-13!2;CL:0000792!9.14e-13!2;CL:0002677!9.14e-13!2;CL:0000898!8.67e-09!3;CL:0000842!5.07e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000815;1.56e-34;2!CL:0000792;1.56e-34;2!CL:0002677;1.56e-34;2!CL:0000898;2.10e-23;3!CL:0000624;3.26e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.56e-34,2;CL:0000792,1.56e-34,2;CL:0002677,1.56e-34,2;CL:0000898,2.10e-23,3;CL:0000624,3.26e-12,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.02e-07!7;UBERON:0000029!5.89e-07!1;UBERON:0001736!8.27e-07!1;UBERON:0006298!8.27e-07!1;UBERON:0000998!9.79e-07!1;UBERON:0006868!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.78e-33;2!UBERON:0005058;1.78e-33;2!UBERON:0009113;1.78e-33;2!UBERON:0004177;4.85e-14;5!UBERON:0005057;4.85e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.59e-17,4;UBERON:0005058,2.59e-17,4;UBERON:0009113,2.59e-17,4;UBERON:0003295,2.59e-17,4;UBERON:0005562,2.59e-17,4;UBERON:0003351,7.08e-12,6;UBERON:0004177,2.58e-10,7;UBERON:0005057,2.58e-10,7;UBERON:0000974,1.73e-07,10;UBERON:0003408,1.73e-07,10;UBERON:0001042,1.73e-07,10;UBERON:0009145,1.73e-07,10;UBERON:0006562,6.94e-07,11;UBERON:0009722,6.94e-07,11;UBERON:0007690,6.94e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.616804496998528,3.00935691703221,8.14805666583976,3.31413464014313,5.84480185223734,2.22820913770347,7.9543595018206,5.53834736459053,13.8109970520158,0.128091319725675,0.650296737799391,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0668451147522,1.86224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@IKZF4 | |||
}} |
Revision as of 13:58, 11 January 2014
Short description: | p9@IKZF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_IKZF4_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 113bp_to_ENST00000551124, uc001sje.1_5end |
EntrezGene: | IKZF4 |
HGNC: | 13179 |
UniProt: | Q9H2S9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.56e-34 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.56e-34 | 2 |
naive regulatory T cell | 1.56e-34 | 2 |
naive T cell | 2.10e-23 | 3 |
CD4-positive, alpha-beta T cell | 3.26e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.59e-17 | 4 |
hemolymphoid system gland | 2.59e-17 | 4 |
thymic region | 2.59e-17 | 4 |
pharyngeal gland | 2.59e-17 | 4 |
thymus primordium | 2.59e-17 | 4 |
pharyngeal epithelium | 7.08e-12 | 6 |
hemopoietic organ | 2.58e-10 | 7 |
immune organ | 2.58e-10 | 7 |
neck | 1.73e-07 | 10 |
gland of gut | 1.73e-07 | 10 |
chordate pharynx | 1.73e-07 | 10 |
pharyngeal region of foregut | 1.73e-07 | 10 |
pharynx | 6.94e-07 | 11 |
entire pharyngeal arch endoderm | 6.94e-07 | 11 |
early pharyngeal endoderm | 6.94e-07 | 11 |