FFCP PHASE1:Hg19::chr11:116662593..116662620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=116519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17288 | |||
|TSSclassifier=weak | |||
|UniProt=Q6Q788 | |||
|association_with_transcript=0bp_to_ENST00000227665,uc009yze.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_APOA5_5end | |||
|id=chr11:116662593..116662620,- | |||
|ontology_enrichment_celltype=CL:0000181!1.63e-40!12;CL:0000417!1.63e-40!12;CL:0000668!1.63e-40!12;CL:0000414!1.63e-40!12;CL:0000412!1.63e-40!12;CL:0000182!1.63e-40!12;CL:0000223!1.36e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.12e-66,12;CL:0000223,1.50e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.37e-53;11!UBERON:0009497;3.67e-45;13!UBERON:0001041;1.44e-19;30!UBERON:0003104;5.40e-19;31!CL:0000223;3.24e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.30e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!5.92e-42!19;UBERON:0006925!5.92e-42!19;UBERON:0008836!5.92e-42!19;UBERON:0005057!2.73e-37!26;UBERON:0008835!4.32e-36!22;UBERON:0003894!4.32e-36!22;UBERON:0009854!1.78e-34!23;UBERON:0007499!1.24e-31!25;UBERON:0009497!1.24e-31!25;UBERON:0000015!1.24e-31!25;UBERON:0002423!1.24e-31!25;UBERON:0006235!1.24e-31!25;UBERON:0004161!1.24e-31!25;UBERON:0002365!3.76e-31!31;UBERON:0002330!3.76e-31!31;UBERON:0009856!2.25e-30!26;UBERON:0002368!2.29e-27!35;UBERON:0003929!6.52e-25!54;UBERON:0002530!1.21e-22!59;UBERON:0000949!5.52e-21!45;UBERON:0005911!8.52e-16!82;UBERON:0005172!9.44e-14!55;UBERON:0005173!9.44e-14!55;UBERON:0002417!2.79e-12!61;UBERON:0000916!2.79e-12!61;UBERON:0001831!3.28e-11!1;UBERON:0001567!3.28e-11!1;UBERON:0008801!3.28e-11!1;UBERON:0004921!5.11e-11!129;UBERON:0004185!5.11e-11!129;UBERON:0001041!8.68e-11!98;UBERON:0000490!2.95e-10!138;UBERON:0000077!2.81e-09!130;UBERON:0001007!7.72e-09!155;UBERON:0001555!7.72e-09!155;UBERON:0007026!7.72e-09!155;UBERON:0004119!6.11e-08!169;UBERON:0000925!6.11e-08!169;UBERON:0006595!6.11e-08!169;UBERON:0002405!2.90e-07!115;UBERON:0005256!7.14e-07!143;UBERON:0001048!9.45e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.44e-69;19!UBERON:0006925;2.44e-69;19!UBERON:0002423;1.30e-52;25!UBERON:0002365;4.76e-41;31!UBERON:0002330;4.76e-41;31!UBERON:0002368;5.78e-36;33!UBERON:0000949;9.81e-26;43!UBERON:0005172;1.05e-15;52!UBERON:0005173;1.05e-15;52!UBERON:0002417;1.55e-14;58!UBERON:0000916;1.55e-14;58!UBERON:0002530;8.86e-13;57!UBERON:0001007;1.47e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-69,19;UBERON:0006925,2.64e-69,19;UBERON:0008836,2.64e-69,19;UBERON:0008835,8.28e-60,22;UBERON:0003894,8.28e-60,22;UBERON:0009854,3.42e-57,23;UBERON:0007499,1.38e-52,25;UBERON:0009497,1.38e-52,25;UBERON:0000015,1.38e-52,25;UBERON:0002423,1.38e-52,25;UBERON:0006235,1.38e-52,25;UBERON:0004161,1.38e-52,25;UBERON:0009856,1.50e-50,26;UBERON:0002365,2.49e-42,31;UBERON:0002330,2.49e-42,31;UBERON:0002368,1.92e-37,35;UBERON:0000949,5.16e-29,45;UBERON:0003929,4.34e-24,54;UBERON:0005172,4.34e-24,54;UBERON:0005173,4.34e-24,54;UBERON:0002530,5.33e-22,59;UBERON:0002417,1.27e-21,60;UBERON:0000916,1.27e-21,60;UBERON:0005911,1.18e-15,82;UBERON:0001041,1.02e-14,87;UBERON:0005177,1.39e-12,101;UBERON:0009569,2.82e-11,112;UBERON:0003914,9.20e-11,117;UBERON:0004921,1.44e-10,118;UBERON:0005256,2.73e-10,122;UBERON:0001007,1.80e-08,145;UBERON:0001555,1.80e-08,145;UBERON:0007026,1.80e-08,145;UBERON:0000490,2.40e-08,148;UBERON:0001048,1.17e-07,160;UBERON:0003104,1.17e-07,160;UBERON:0009142,1.17e-07,160;UBERON:0004119,1.32e-07,160;UBERON:0000925,1.32e-07,160;UBERON:0006595,1.32e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,8.84544495009863,33.67502468084,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2922905025562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4395833273918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,2.91497774536727,1.56590130924216,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.5692213063974,10.6005511129777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@APOA5 | |||
}} |
Revision as of 10:28, 11 January 2014
Short description: | p1@APOA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_APOA5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000227665, uc009yze.2_5end |
EntrezGene: | APOA5 |
HGNC: | 17288 |
UniProt: | Q6Q788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.12e-66 | 12 |
endodermal cell | 1.50e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.30e-07 | 39 |