FFCP PHASE1:Hg19::chr11:85522205..85522214,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15585 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000527523_5end | |||
|description=CAGE_peak_6_at_SYTL2_5end | |||
|id=chr11:85522205..85522214,- | |||
|ontology_enrichment_celltype=CL:0000791!3.58e-09!18;CL:0000789!3.58e-09!18;CL:0002420!3.58e-09!18;CL:0002419!3.58e-09!18;CL:0000790!3.58e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.48e-13;18!CL:0000789;1.48e-13;18!CL:0002419;1.48e-13;18!CL:0000625;1.20e-10;11!CL:0000084;5.46e-10;25!CL:0000097;9.43e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.92e-14,18;CL:0000789,3.92e-14,18;CL:0002420,3.92e-14,18;CL:0002419,3.92e-14,18;CL:0000790,3.92e-14,18;CL:0000625,6.17e-11,11;CL:0000084,2.48e-10,25;CL:0000827,2.48e-10,25;CL:0000097,8.59e-09,5;CL:0002028,8.59e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.48e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.13e-15!115;UBERON:0001049!1.34e-11!57;UBERON:0005068!1.34e-11!57;UBERON:0006241!1.34e-11!57;UBERON:0007135!1.34e-11!57;UBERON:0003080!3.26e-11!42;UBERON:0001869!3.55e-11!32;UBERON:0001893!3.69e-11!34;UBERON:0001950!4.16e-11!20;UBERON:0002619!8.24e-11!22;UBERON:0002780!9.13e-11!41;UBERON:0001890!9.13e-11!41;UBERON:0006240!9.13e-11!41;UBERON:0002020!1.08e-10!34;UBERON:0003528!1.08e-10!34;UBERON:0002791!1.26e-10!33;UBERON:0002616!2.66e-10!59;UBERON:0000956!2.89e-10!25;UBERON:0000203!2.89e-10!25;UBERON:0000955!1.19e-09!69;UBERON:0006238!1.19e-09!69;UBERON:0001017!1.42e-08!82;UBERON:0005743!7.28e-08!86;UBERON:0000073!6.20e-07!94;UBERON:0001016!6.20e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.50e-22;22!UBERON:0001950;9.52e-22;20!UBERON:0000956;1.24e-18;25!UBERON:0000203;1.24e-18;25!UBERON:0001869;4.11e-15;32!UBERON:0001893;1.20e-13;34!UBERON:0002791;1.68e-13;32!UBERON:0003528;2.74e-12;34!UBERON:0002020;2.74e-12;34!UBERON:0000200;1.23e-09;6!UBERON:0002780;1.90e-09;41!UBERON:0001890;1.90e-09;41!UBERON:0001871;8.46e-09;6!UBERON:0000160;5.67e-07;17!UBERON:0000059;9.82e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.08e-22,22;UBERON:0001950,2.99e-22,20;UBERON:0000956,4.62e-19,25;UBERON:0000203,4.62e-19,25;UBERON:0001869,4.38e-17,32;UBERON:0001893,1.04e-15,34;UBERON:0002791,2.40e-15,32;UBERON:0003528,4.29e-14,34;UBERON:0002020,4.29e-14,34;UBERON:0002780,3.60e-13,41;UBERON:0001890,3.60e-13,41;UBERON:0003080,3.60e-13,41;UBERON:0006240,3.60e-13,41;UBERON:0000200,4.43e-10,6;UBERON:0001871,7.36e-09,6;UBERON:0001049,9.08e-09,56;UBERON:0005068,9.08e-09,56;UBERON:0006241,9.08e-09,56;UBERON:0007135,9.08e-09,56;UBERON:0000073,9.12e-09,53;UBERON:0002616,9.12e-09,53;UBERON:0003056,3.28e-08,61;UBERON:0000160,5.44e-07,17;UBERON:0007023,5.52e-07,114;UBERON:0000059,6.38e-07,11 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0.662794751455832,0,0,0,0,0.61560529038394,0.816002764977012,0.940364164434263,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0.786728553697808,1.91914699048606,0.309632246632152,0.919421224478927,0,0,0,1.56386155736164,0.587200878669695,0,0.200544447470142,0.434021741431704,0.223915474239924,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.37696839079683,2.75107533924415,1.85041349099558,0.334372990781356,1.30368906653436,0.473447805734733,0,1.44833593950726,0.294605907474837,0.886135578334485,0.812411591295047,1.28091319725675,0.650296737799391,0.493313713811028,0.829050053357545,1.44901542867526,1.63115219478266,6.42097987415311,2.09071047609954,2.15287751125376,1.91610246800961,1.71813722741315,2.78321661221453,0.637130828648193,3.90650072313851,1.90090408889675,3.01150238155546,2.68771883424279,0,2.60454977248419,2.46338399076314,2.82249440514625,5.34880391567015,2.89648807765598,0,0,0,0,0,0.724232594804119,0,0,0.378139268656271,0,0.263504357079378,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0,0.794455084879313,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0.61246251376468,0.491337269247072,0.206651562351531,2.37600571456411,0.989067717114227,0.910161361938026,0,0.336672227908132,0.250237039743928,1.10825646193673,2.19488810440419,0.919463387397059,1.80285670687916,0,1.25572744982203,1.06778694409284,1.69545520927649,0.900273288253207,0.92747276314595,2.57640540045629,1.11670113798954,0.506328996723799,0.0974370051611986,1.26216887122057,0.460249493211497,0,1.06502877754984,0.403008392910561,0.508681776931463,0,0.545492241181669,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,1.28648187638577,0,2.78620756819187,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0.439001141634502,0,0,0,0,1.03993478527958,0,0,0,0,0,0,3.95102198979638,6.00940313466411,0,0,0,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,1.47798971368783,3.43388892651582,6.84182781284548,6.77363781059719,8.07951573928832,0.126995788584338,0,0,0,0.616964956219941,0,0.571652865261156,0,0,0,0.646358578788889,0,0,0.797814349754612,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,2.85273810081437,0.289562613335158,1.43833425785268,0.358121926479791,0.896681151948218,3.74358444383662,3.88129634747131,2.31017465303547,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0.36807447515742,0,1.62759014219841,2.07970861530807,0.892144943985809,1.41932173530541,0.819989904948992,0.601892199455438,0,0,1.32845119707087,0.368738337083406,0.868836144680828,0,0,3.92859249633486,1.72571360654893,1.49418580924822,0,0,0,0,0.306923946576125,0.561320188866147,0,0.511707249066704,0.160853921143607,0,0,0,0.574890092096664,0,0.348631135379878,0.483437798366489,0.40101294060657,0,1.83703117063371,1.45672934405374,0.786746489756545,0,0.385076685522074,0,0,0.844413031143006,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,1.09883357782012,0.742585499285292,1.14853107599234,0,0,0.193341436584244,0.154048617114644,0.614014698904518,0.413509717453592,0.429680979473094,0.580066775656914,0.596586391912706,0.623224249527161,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.762520775695299,0.255897791311334,0.855877976067841,0,0,1.2591072030832,1.37268514868027,0.824686816419805,0,0,0,0,0,0,2.04749867111979,1.1312434556297,0,0,0,0,0,1.9676842561399,0,0.30982349809975,0.281695602532241,0.860468113224309,0.196498082026242,0,1.06428319221179,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0.507447609232169,0,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,2.70015718619057,0.79312517629427,0.213648142254946,0,0,0,0,0,0,1.39705560002972,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0,0,5.96488588659779,4.3607519087259,0.111308705022906,0,0.63337622438398,1.39473591775749,1.65770349318689,0.755798243562828,0.20453736500431,0,0.622079175323615,0.179736702294654,0,0,0.591860433821602,0,0,0.969332746095218,1.57705766875147,0,8.33368835472746,0.262379999988587,1.44999915086959,1.0241410345695,0.508507300585533,0,2.06846023944879,0,0.347249989866585,0,0.482385754501632,0,0.331737779793674,0.295547618953547,4.387707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| |||
|short_description=p6@SYTL2 | |||
}} |
Revision as of 09:44, 11 January 2014
Short description: | p6@SYTL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYTL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000527523_5end |
EntrezGene: | SYTL2 |
HGNC: | 15585 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.92e-14 | 18 |
alpha-beta T cell | 3.92e-14 | 18 |
immature T cell | 3.92e-14 | 18 |
mature T cell | 3.92e-14 | 18 |
immature alpha-beta T cell | 3.92e-14 | 18 |
CD8-positive, alpha-beta T cell | 6.17e-11 | 11 |
T cell | 2.48e-10 | 25 |
pro-T cell | 2.48e-10 | 25 |
mast cell | 8.59e-09 | 5 |
basophil mast progenitor cell | 8.59e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.08e-22 | 22 |
neocortex | 2.99e-22 | 20 |
cerebral cortex | 4.62e-19 | 25 |
pallium | 4.62e-19 | 25 |
cerebral hemisphere | 4.38e-17 | 32 |
telencephalon | 1.04e-15 | 34 |
regional part of telencephalon | 2.40e-15 | 32 |
brain grey matter | 4.29e-14 | 34 |
gray matter | 4.29e-14 | 34 |
regional part of forebrain | 3.60e-13 | 41 |
forebrain | 3.60e-13 | 41 |
anterior neural tube | 3.60e-13 | 41 |
future forebrain | 3.60e-13 | 41 |
gyrus | 4.43e-10 | 6 |
temporal lobe | 7.36e-09 | 6 |
neural tube | 9.08e-09 | 56 |
neural rod | 9.08e-09 | 56 |
future spinal cord | 9.08e-09 | 56 |
neural keel | 9.08e-09 | 56 |
regional part of nervous system | 9.12e-09 | 53 |
regional part of brain | 9.12e-09 | 53 |
pre-chordal neural plate | 3.28e-08 | 61 |
intestine | 5.44e-07 | 17 |
adult organism | 5.52e-07 | 114 |
large intestine | 6.38e-07 | 11 |