FFCP PHASE1:Hg19::chr10:105344750..105344762,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7761 | |||
|TSSclassifier=strong | |||
|UniProt=B4DS86 | |||
|association_with_transcript=35bp_to_AK299620_5end | |||
|description=CAGE_peak_14_at_NEURL_5end | |||
|id=chr10:105344750..105344762,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.24e-11;2!CL:0000039;6.88e-07;7!CL:0000586;6.88e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.71e-11,2;CL:0000039,6.88e-07,7;CL:0000586,6.88e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.54e-16;29!UBERON:0009117;2.96e-08;10!UBERON:0005564;2.96e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.32e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.50e-17,5;DOID:305,1.29e-11,106;DOID:162,6.46e-11,235;DOID:14566,1.45e-10,239;DOID:0050687,8.90e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.21e-12!9;UBERON:0001557!5.16e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.01e-45;9!UBERON:0001557;1.01e-45;9!UBERON:0000002;3.97e-14;6!UBERON:0001560;3.97e-14;6!UBERON:0000072;1.08e-11;37!UBERON:0006955;3.24e-11;2!UBERON:0004801;3.24e-11;2!UBERON:0000473;2.68e-10;8!UBERON:0000065;2.29e-09;44!UBERON:0003135;1.65e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.44e-46,9;UBERON:0001557,6.85e-21,19;UBERON:0000002,3.54e-14,6;UBERON:0001560,3.54e-14,6;UBERON:0008947,5.84e-12,38;UBERON:0003258,5.84e-12,38;UBERON:0006955,2.71e-11,2;UBERON:0004801,2.71e-11,2;UBERON:0000473,2.66e-10,8;UBERON:0000072,2.61e-09,47;UBERON:0000065,7.28e-08,54;UBERON:0003135,1.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.68152568894461,0.790152254325231,0.590129310341499,0,0,0.668745981562712,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0.664601683750863,0.270803863765016,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0.869409257205157,0.444859689486181,0,0,0.679856056185397,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0,0,0,1.17881167947941,0.364295288292542,0,0,0.348259474598534,0.132957960518865,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.600952235626387,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,3.90412440131485,2.52877035117153,2.6511213287183,3.19852520923942,3.92182999366331,2.84724742933316,3.10112008768378,2.15843611637881,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,1.85194205030644,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,1.56869953835371,0,0.105551628892876,2.27466768141793,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0.640986253728404,0.41254749960294,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50737800003409,0.997896857164083,0.766021480529467,0,6.49243880549111,0,0,0,0,0,0,0,0,0,1.84344458585075,2.46043718681657,1.50164227540718,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,2.50558466093677,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,3.5694274697965,0.17472666824203,0,1.74161396320353,2.11959019549938,2.13500188338344,0,0,0,0,0,0.253243183823515,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,1.01980882368113,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,1.798532254171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0.963099152036517,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0.252071696221718,0.414943514785307,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.339848664884159,0.460409414939944,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0,4.91272873270422,0,2.85408217866165,0,0,0,0,0,0.470317296361523,0,0,0.588925401344836,0.594092800654172,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0.458729283404541,0.143339583151451,2.68211655728414,0.407948941145488,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0.917899467677836,1.60330443159336,2.20547758883628,1.75495277504663,0.530450887527676,3.7514978221865,0,0.20686599172379,0,0.476128862927481,0.129177819672012,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,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| |||
|short_description=p14@NEURL | |||
}} |
Revision as of 04:48, 11 January 2014
Short description: | p14@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NEURL_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_AK299620_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | B4DS86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.71e-11 | 2 |
germ line cell | 6.88e-07 | 7 |
germ cell | 6.88e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.44e-46 | 9 |
upper respiratory tract | 6.85e-21 | 19 |
uterine cervix | 3.54e-14 | 6 |
neck of organ | 3.54e-14 | 6 |
respiratory primordium | 5.84e-12 | 38 |
endoderm of foregut | 5.84e-12 | 38 |
uterine epithelium | 2.71e-11 | 2 |
cervix epithelium | 2.71e-11 | 2 |
testis | 2.66e-10 | 8 |
segment of respiratory tract | 2.61e-09 | 47 |
respiratory tract | 7.28e-08 | 54 |
male reproductive organ | 1.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.50e-17 | 5 |
carcinoma | 1.29e-11 | 106 |
cancer | 6.46e-11 | 235 |
disease of cellular proliferation | 1.45e-10 | 239 |
cell type cancer | 8.90e-10 | 143 |