FFCP PHASE1:Hg19::chr10:72141330..72141337,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23421 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCA0 | |||
|association_with_transcript=76bp_to_ENST00000395010,ENST00000395011,NM_207119,uc001jqx.1_5end | |||
|coexpression_cluster_id=C2070 | |||
|description=CAGE_peak_12_at_LRRC20_5end | |||
|id=chr10:72141330..72141337,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.44e-21;10!UBERON:0005564;9.44e-21;10!UBERON:0006603;1.28e-08;65!UBERON:0003104;3.48e-07;31 | |||
|ontology_enrichment_disease=DOID:114!3.58e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!3.94e-37!2;UBERON:0005090!3.94e-37!2;UBERON:0005418!1.56e-19!1;UBERON:0001389!1.56e-19!1;UBERON:0000026!1.56e-19!1;UBERON:0008784!1.56e-19!1;UBERON:0006058!1.56e-19!1;UBERON:0003663!1.56e-19!1;UBERON:0001383!1.56e-19!1;UBERON:0004256!1.56e-19!1;UBERON:0002529!1.56e-19!1;UBERON:0004708!1.56e-19!1;UBERON:0002101!1.56e-19!1;UBERON:0004709!1.56e-19!1;UBERON:0003661!1.56e-19!1;UBERON:0002471!1.56e-19!1;UBERON:0004357!1.56e-19!1;UBERON:0009872!1.56e-19!1;UBERON:0004347!1.56e-19!1;UBERON:0005420!1.56e-19!1;UBERON:0005732!1.56e-19!1;UBERON:0006057!1.56e-19!1;UBERON:0000978!1.56e-19!1;UBERON:0002103!1.56e-19!1;UBERON:0001665!1.56e-19!1;UBERON:0003823!1.56e-19!1;UBERON:0000154!1.56e-19!1;UBERON:0005733!1.56e-19!1;UBERON:0005730!1.56e-19!1;UBERON:0002426!1.88e-19!1;UBERON:0003831!1.88e-19!1;UBERON:0003898!1.88e-19!1;UBERON:0004830!1.88e-19!1;UBERON:0001774!1.88e-19!1;UBERON:0003830!1.88e-19!1;UBERON:0005175!1.88e-19!1;UBERON:0003897!1.88e-19!1;UBERON:0001103!1.88e-19!1;UBERON:0010084!1.88e-19!1;UBERON:0002079!2.25e-19!1;UBERON:0000989!3.91e-19!1;UBERON:0008811!3.91e-19!1;UBERON:0006258!3.91e-19!1;UBERON:0005876!3.91e-19!1;UBERON:0004874!3.91e-19!1;UBERON:0003135!1.68e-15!11;UBERON:0007023!3.67e-12!115;UBERON:0002081!2.27e-10!2;UBERON:0000341!2.72e-10!2;UBERON:0000473!3.85e-10!8;UBERON:0003101!4.66e-08!22;UBERON:0000079!4.66e-08!22;UBERON:0004151!2.47e-07!3;UBERON:0001723!2.63e-07!3;UBERON:0001033!2.63e-07!3;UBERON:0010056!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.99e-50;1!UBERON:0000026;3.99e-50;1!UBERON:0008784;3.99e-50;1!UBERON:0006058;3.99e-50;1!UBERON:0003663;3.99e-50;1!UBERON:0004256;3.99e-50;1!UBERON:0004708;3.99e-50;1!UBERON:0002101;3.99e-50;1!UBERON:0004709;3.99e-50;1!UBERON:0002529;3.99e-50;1!UBERON:0010538;3.99e-50;1!UBERON:0003661;3.99e-50;1!UBERON:0010890;3.99e-50;1!UBERON:0002471;3.99e-50;1!UBERON:0001383;3.99e-50;1!UBERON:0010758;3.99e-50;1!UBERON:0010707;3.99e-50;1!UBERON:0000978;3.99e-50;1!UBERON:0002103;3.99e-50;1!UBERON:0001665;3.99e-50;1!UBERON:0003823;3.99e-50;1!UBERON:0000154;3.99e-50;1!UBERON:0010709;3.99e-50;1!UBERON:0005090;7.14e-26;2!UBERON:0001630;7.14e-26;2!UBERON:0000473;1.26e-25;8!UBERON:0003135;5.63e-19;11!UBERON:0001134;1.83e-13;16!UBERON:0002036;1.83e-13;16!UBERON:0000991;1.77e-10;21!UBERON:0003101;4.74e-10;22!UBERON:0000079;4.74e-10;22!UBERON:0002385;1.13e-07;31!UBERON:0001015;1.13e-07;31!UBERON:0000383;1.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.58e-50,1;UBERON:0001389,6.58e-50,1;UBERON:0000026,6.58e-50,1;UBERON:0008784,6.58e-50,1;UBERON:0006058,6.58e-50,1;UBERON:0003663,6.58e-50,1;UBERON:0004256,6.58e-50,1;UBERON:0004708,6.58e-50,1;UBERON:0002101,6.58e-50,1;UBERON:0004709,6.58e-50,1;UBERON:0002529,6.58e-50,1;UBERON:0010538,6.58e-50,1;UBERON:0003661,6.58e-50,1;UBERON:0010890,6.58e-50,1;UBERON:0002471,6.58e-50,1;UBERON:0001383,6.58e-50,1;UBERON:0004357,6.58e-50,1;UBERON:0004347,6.58e-50,1;UBERON:0005420,6.58e-50,1;UBERON:0005732,6.58e-50,1;UBERON:0010758,6.58e-50,1;UBERON:0010707,6.58e-50,1;UBERON:0000978,6.58e-50,1;UBERON:0002103,6.58e-50,1;UBERON:0001665,6.58e-50,1;UBERON:0003823,6.58e-50,1;UBERON:0000154,6.58e-50,1;UBERON:0010709,6.58e-50,1;UBERON:0005733,6.58e-50,1;UBERON:0005730,6.58e-50,1;UBERON:0005090,9.18e-26,2;UBERON:0001630,9.18e-26,2;UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0007023,8.86e-08,114 | |||
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|short_description=p12@LRRC20 | |||
}} |
Revision as of 03:19, 11 January 2014
Short description: | p12@LRRC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LRRC20_5end |
Coexpression cluster: | C2070_testis_skeletal_diaphragm_left_throat_cord_tongue |
Association with transcript: | 76bp_to_ENST00000395010, ENST00000395011, NM_207119, uc001jqx.1_5end |
EntrezGene: | LRRC20 |
HGNC: | 23421 |
UniProt: | Q8TCA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data