FFCP PHASE1:Hg19::chr1:240726634..240726648,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2107 | |||
|description=CAGE_peak_at_chr1:240726634..240726648,- | |||
|id=chr1:240726634..240726648,- | |||
|ontology_enrichment_celltype=CL:0002620!4.08e-14!23;CL:0000057!1.83e-13!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.95e-13;23!CL:0002580;2.98e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.07e-12,23;CL:0002580,3.67e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.38e-08!5;DOID:450!3.38e-08!5;DOID:66!3.38e-08!5;DOID:423!3.38e-08!5;DOID:0080000!3.38e-08!5;DOID:11722!3.38e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;2.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.94e-15!41;UBERON:0001890!4.94e-15!41;UBERON:0006240!4.94e-15!41;UBERON:0003080!1.66e-14!42;UBERON:0001049!6.51e-14!57;UBERON:0005068!6.51e-14!57;UBERON:0006241!6.51e-14!57;UBERON:0007135!6.51e-14!57;UBERON:0002616!3.72e-13!59;UBERON:0007023!1.17e-12!115;UBERON:0002020!3.27e-11!34;UBERON:0003528!3.27e-11!34;UBERON:0000955!8.07e-11!69;UBERON:0006238!8.07e-11!69;UBERON:0001869!9.71e-11!32;UBERON:0001017!2.49e-10!82;UBERON:0001893!7.96e-10!34;UBERON:0005743!1.91e-09!86;UBERON:0002619!2.69e-09!22;UBERON:0000073!3.50e-09!94;UBERON:0001016!3.50e-09!94;UBERON:0002791!3.55e-09!33;UBERON:0001950!3.76e-09!20;UBERON:0000153!7.39e-09!129;UBERON:0007811!7.39e-09!129;UBERON:0003056!1.26e-08!61;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0000475!3.47e-08!365;UBERON:0002097!5.17e-08!40;UBERON:0001894!5.74e-08!7;UBERON:0006222!5.74e-08!7;UBERON:0000033!6.89e-08!123;UBERON:0000956!8.41e-08!25;UBERON:0000203!8.41e-08!25;UBERON:0002346!9.43e-08!90;UBERON:0003296!1.03e-07!4;UBERON:0010133!1.03e-07!4;UBERON:0002199!1.83e-07!45;UBERON:0002416!1.83e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.90e-25;4!UBERON:0010133;8.90e-25;4!UBERON:0001894;3.00e-14;7!UBERON:0001905;1.17e-13;2!UBERON:0002757;1.17e-13;2!UBERON:0010134;1.17e-13;2!UBERON:0005408;1.17e-13;2!UBERON:0001899;1.17e-13;2!UBERON:0000007;6.62e-13;2!UBERON:0002108;2.61e-11;4!UBERON:0002114;6.73e-09;2!UBERON:0002784;3.01e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.95e-25,4;UBERON:0010133,2.95e-25,4;UBERON:0001894,1.61e-14,7;UBERON:0006222,1.61e-14,7;UBERON:0001905,1.04e-13,2;UBERON:0002757,1.04e-13,2;UBERON:0010134,1.04e-13,2;UBERON:0005408,1.04e-13,2;UBERON:0001899,1.04e-13,2;UBERON:0000007,2.49e-13,2;UBERON:0002108,2.66e-11,4;UBERON:0002114,4.88e-09,2;UBERON:0002780,3.96e-08,41;UBERON:0001890,3.96e-08,41;UBERON:0003080,3.96e-08,41;UBERON:0006240,3.96e-08,41;UBERON:0002784,2.83e-07,4 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,1.35117749042945,0.103325781175765,0,0.741800787835671,0,0,0.505008341862199,0.375355559615893,0,0,0.612975591598039,0,0,7.89314397030993,0.213557388818567,0.635795703478686,6.30191301777245,0.515262646192195,3.60696756063881,0.37223371266318,3.71307930930786,0.487185025805993,20.1947019395292,0.644349290496095,1.13152239773168,4.26011511019937,0.403008392910561,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0.336255431980582,0,0,0.256686072559497,0,1.30139853857622,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0.535286966391485,1.57702415033935,1.28855556491985,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,6.90578879796281,1.12264037773229,0,0.511707249066704,0.321707842287215,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12748913591143,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0,0.234264445725339,0,0,0,0,0,1.83643656978294,0.252746318513952,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.439656701034247,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.628817220398664,0,0,0.197611631897944,0,0,0,0,0,0,0,0.886068179966986,0,0.625954653532499,0,0.221858103073705,0,1.24513771442608,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06037423109676,2.02049693259551,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.877136198314828,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,1.51243017733031,0,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627,1.09394961803644,0,0.496211178389294,0,0,2.67850917939143,3.69912094440706,1.82089681270989,1.59363533945908,0.266107110487916,0,0.342976018874837,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,1.09279780251979,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,1.30905207102113,1.5870805215462,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0.714193294391221,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:240726634..240726648,- | |||
}} |
Revision as of 01:00, 11 January 2014
Short description: | p@chr1:240726634..240726648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:240726634..240726648, - |
Coexpression cluster: | C2107_Fibroblast_Preadipocyte_mesenchymal_Chondrocyte_glioblastoma_Saos2_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.07e-12 | 23 |
preadipocyte of the breast | 3.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.95e-25 | 4 |
neuroendocrine gland | 2.95e-25 | 4 |
diencephalon | 1.61e-14 | 7 |
future diencephalon | 1.61e-14 | 7 |
pineal body | 1.04e-13 | 2 |
regional part of epithalamus | 1.04e-13 | 2 |
secretory circumventricular organ | 1.04e-13 | 2 |
circumventricular organ | 1.04e-13 | 2 |
epithalamus | 1.04e-13 | 2 |
pituitary gland | 2.49e-13 | 2 |
small intestine | 2.66e-11 | 4 |
duodenum | 4.88e-09 | 2 |
regional part of forebrain | 3.96e-08 | 41 |
forebrain | 3.96e-08 | 41 |
anterior neural tube | 3.96e-08 | 41 |
future forebrain | 3.96e-08 | 41 |
regional part of diencephalon | 2.83e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.21e-07 | 1 |