FFCP PHASE1:Hg19::chr1:210406830..210406870,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:210406830..210406870,- | |||
|id=chr1:210406830..210406870,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;2.81e-12;2!CL:1000500;2.81e-12;2!CL:1000618;2.81e-12;2!CL:1001318;2.81e-12;2!CL:0002173;2.81e-12;2!CL:1000746;1.10e-07;7!CL:1000612;1.10e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,5.23e-12,2;CL:1000500,5.23e-12,2;CL:1000618,5.23e-12,2;CL:1001318,5.23e-12,2;CL:0002173,5.23e-12,2;CL:1000746,1.31e-07,7;CL:1000612,1.31e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.99e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.95e-23!94;UBERON:0001016!1.95e-23!94;UBERON:0001017!1.78e-21!82;UBERON:0005743!1.78e-20!86;UBERON:0000955!1.05e-17!69;UBERON:0006238!1.05e-17!69;UBERON:0001049!1.30e-16!57;UBERON:0005068!1.30e-16!57;UBERON:0006241!1.30e-16!57;UBERON:0007135!1.30e-16!57;UBERON:0001869!1.54e-14!32;UBERON:0002616!1.54e-14!59;UBERON:0002020!1.55e-14!34;UBERON:0003528!1.55e-14!34;UBERON:0001893!3.93e-14!34;UBERON:0003075!5.21e-14!86;UBERON:0007284!5.21e-14!86;UBERON:0004121!5.88e-14!169;UBERON:0002780!1.13e-13!41;UBERON:0001890!1.13e-13!41;UBERON:0006240!1.13e-13!41;UBERON:0002791!2.81e-13!33;UBERON:0003080!4.02e-13!42;UBERON:0000924!4.05e-13!173;UBERON:0006601!4.05e-13!173;UBERON:0002346!1.03e-12!90;UBERON:0007023!4.61e-12!115;UBERON:0003056!1.43e-11!61;UBERON:0000153!8.05e-11!129;UBERON:0007811!8.05e-11!129;UBERON:0001737!1.20e-10!9;UBERON:0000033!1.74e-10!123;UBERON:0000064!7.49e-10!219;UBERON:0000956!3.82e-09!25;UBERON:0000203!3.82e-09!25;UBERON:0001950!5.94e-09!20;UBERON:0002619!7.55e-09!22;UBERON:0000468!2.35e-07!659;UBERON:0002308!2.46e-07!9;UBERON:0000125!2.46e-07!9;UBERON:0000922!8.01e-07!612;UBERON:0001557!9.85e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.67e-28;9!UBERON:0001557;1.67e-28;9!UBERON:0003567;2.81e-12;2!UBERON:0003838;2.81e-12;2!UBERON:0003586;2.81e-12;2!UBERON:0005169;2.81e-12;2!UBERON:0002321;2.81e-12;2!UBERON:0005215;2.81e-12;2!UBERON:0002303;2.81e-12;2!UBERON:0002319;2.81e-12;2!UBERON:0006554;3.94e-08;30!UBERON:0001008;3.94e-08;30!UBERON:0002113;9.22e-08;24!UBERON:0011143;9.22e-08;24!UBERON:0000074;1.10e-07;7!UBERON:0001229;1.10e-07;7!UBERON:0001869;7.50e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.35e-29,9;UBERON:0001557,2.79e-13,19;UBERON:0003567,5.23e-12,2;UBERON:0003838,5.23e-12,2;UBERON:0003586,5.23e-12,2;UBERON:0005169,5.23e-12,2;UBERON:0002321,5.23e-12,2;UBERON:0005215,5.23e-12,2;UBERON:0002303,5.23e-12,2;UBERON:0002319,5.23e-12,2;UBERON:0010532,1.31e-07,7;UBERON:0000074,1.31e-07,7;UBERON:0001229,1.31e-07,7;UBERON:0001230,1.31e-07,7;UBERON:0003220,1.31e-07,7;UBERON:0005749,1.31e-07,7;UBERON:0004199,1.31e-07,7;UBERON:0004209,1.31e-07,7;UBERON:0004198,1.31e-07,7;UBERON:0001016,2.28e-07,89;UBERON:0002113,3.85e-07,26;UBERON:0003918,3.85e-07,26;UBERON:0011143,3.85e-07,26;UBERON:0005095,3.85e-07,26;UBERON:0007687,3.85e-07,26;UBERON:0001869,4.06e-07,32;UBERON:0001017,4.25e-07,81;UBERON:0002780,4.65e-07,41;UBERON:0001890,4.65e-07,41;UBERON:0003080,4.65e-07,41;UBERON:0006240,4.65e-07,41;UBERON:0003056,6.51e-07,61;UBERON:0002902,7.82e-07,1;UBERON:0009899,7.82e-07,1;UBERON:0000941,9.79e-07,1;UBERON:0001785,9.79e-07,1;UBERON:0002464,9.79e-07,1;UBERON:0004904,9.79e-07,1;UBERON:0001021,9.79e-07,1;UBERON:0003902,9.79e-07,1;UBERON:0005425,9.79e-07,1 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0.795285947051099,0,0.661743720148475,1.33037638477538,0.351339142772504,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0.37223371266318,0,0,0,0.0920498986422993,0,0,0.403008392910561,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,1.41968160047813,1.68584690078102,1.20505514941741,1.65440959098591,1.74303555273925,1.42362371466658,0.808987848960987,0.588664395376038,1.92373578473195,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.51336800074665,0.904902010304444,0,0,2.6593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,1.00509759200609,1.91381625495949,0,0,0,0,0,0,0,0.713715955188647,0.788512075169673,0.35142424497814,1.50473049863859,0,0,0,0.737476674166813,0.434418072340414,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0,1.02341449813341,0,0,0.616838775210622,0.355123450626254,0,0,0,0,0,0,0,0.182091168006717,0,0,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,1.54227252690289,1.08378575017541,3.51182841698397,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,1.29151611801369,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0.398495976502139,0.276283915531148,0,0.715880777515084,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,5.98841394003583,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,1.77148277162768,0.844175070377856,0,0,1.77328571372128,0.438770794307945,0,0,0,0.227884111694002,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,0.30607276163049,0.505492637027904,2.70582154946087,1.7626992537532,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.886351143382302,0,0.400794101257669,0,1.39866726707491,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0.415440338029185,0,0,0.789744236554321,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.646414781807753,0.92562821219883,0,0,0,0,0,0,0,3.89736314818867,0,0.544017803369474,0,0,0,0,0,0.244052529803926,0.876336514945499,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0.53168342911599,1.04349012362347,0,0,0,0,0,0,1.59238355479446,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0.323474434190045,0.314531883711793,0.982886743728125,0,0,0,0,0,0,0,0,0.6124909547064,1.02766760154335,0,0.957803154342908,2.46139637088906,0,1.59061680667701,0.322951291263702,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,1.2832141077495,0,0.826747186004736,0.634158101939068,1.09394961803644,0.548257766857182,0,0,0.127762427639595,0,0,0,1.82129753081038,0,0,0.514464028312255,0.679697329768317,1.18390992413128,0,0,0.078493092850514,0.942693539496011,0,0.913158720509496,0,0,0.142953088353313,0.632054446930906,0,0.347716544605159,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0,0.219881033490858,0,0.231522474323834,0,0,0.490296643507811,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0.815897882290976,0.436350690340377,0,0,0,0.432626562123789,0.504665699340316,0.109265571963696,0.886889507080059,0.203977659483963,0.26721740526556,0.0918948995348449,0,0,0,0,0.20686599172379,0.213233981900981,0.23806443146374,0.193766729508018,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:210406830..210406870,- | |||
}} |
Revision as of 00:02, 11 January 2014
Short description: | p@chr1:210406830..210406870, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:210406830..210406870, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 5.23e-12 | 2 |
kidney interstitial cell | 5.23e-12 | 2 |
juxtaglomerular complex cell | 5.23e-12 | 2 |
renal interstitial pericyte | 5.23e-12 | 2 |
extraglomerular mesangial cell | 5.23e-12 | 2 |
glomerular cell | 1.31e-07 | 7 |
kidney corpuscule cell | 1.31e-07 | 7 |