FFCP PHASE1:Hg19::chr1:207096529..207096554,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |||
|TSSclassifier=strong | |||
|UniProt=E9PN59 | |||
|association_with_transcript=0bp_to_ENST00000525793_5end | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_FAIM3_5end | |||
|id=chr1:207096529..207096554,- | |||
|ontology_enrichment_celltype=CL:0000542!9.79e-58!53;CL:0000051!9.79e-58!53;CL:0000838!4.31e-56!52;CL:0000738!2.26e-32!140;CL:0002087!6.70e-30!119;CL:0000037!6.70e-29!172;CL:0000566!6.70e-29!172;CL:0000945!1.01e-28!24;CL:0000826!1.01e-28!24;CL:0000791!1.24e-28!18;CL:0000789!1.24e-28!18;CL:0002420!1.24e-28!18;CL:0002419!1.24e-28!18;CL:0000790!1.24e-28!18;CL:0000988!3.59e-27!182;CL:0002032!4.58e-24!165;CL:0000837!4.58e-24!165;CL:0000084!7.71e-24!25;CL:0000827!7.71e-24!25;CL:0002031!6.71e-23!124;CL:0000236!1.18e-22!14;CL:0000625!2.27e-17!11;CL:0000624!3.44e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.62e-43;18!CL:0000789;4.62e-43;18!CL:0002419;4.62e-43;18!CL:0000542;1.59e-41;53!CL:0000084;6.85e-37;25!CL:0000945;8.79e-30;24!CL:0000625;9.87e-26;11!CL:0000236;3.49e-23;13!CL:0000624;2.67e-16;6!CL:0002087;1.06e-11;104!CL:0000898;2.14e-09;3!CL:0000226;6.43e-08;3!CL:0000623;6.43e-08;3!CL:0000842;6.43e-08;3!CL:0000815;5.39e-07;2!CL:0000792;5.39e-07;2!CL:0002677;5.39e-07;2!CL:0000738;6.11e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.49e-75,53;CL:0000051,2.49e-75,53;CL:0000838,7.04e-73,52;CL:0000791,3.16e-43,18;CL:0000789,3.16e-43,18;CL:0002420,3.16e-43,18;CL:0002419,3.16e-43,18;CL:0000790,3.16e-43,18;CL:0000084,6.24e-37,25;CL:0000827,6.24e-37,25;CL:0002087,5.88e-35,115;CL:0000738,2.12e-32,136;CL:0000945,7.08e-30,24;CL:0000826,7.08e-30,24;CL:0002031,2.13e-26,120;CL:0000625,7.42e-26,11;CL:0000236,7.72e-26,14;CL:0000037,7.26e-24,168;CL:0000988,5.01e-22,177;CL:0002032,2.42e-20,161;CL:0000837,2.42e-20,161;CL:0000624,2.41e-16,6;CL:0000898,1.92e-09,3;CL:0000226,5.54e-08,3;CL:0000623,5.54e-08,3;CL:0000842,5.54e-08,3;CL:0000825,5.54e-08,3;CL:0000815,4.75e-07,2;CL:0000792,4.75e-07,2;CL:0002677,4.75e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.62e-43;18!CL:0000051;1.59e-41;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.97e-13!15;UBERON:0000179!2.97e-13!15;UBERON:0000463!2.97e-13!15;UBERON:0004177!8.05e-12!7;UBERON:0002370!2.83e-08!4;UBERON:0005058!2.83e-08!4;UBERON:0009113!2.83e-08!4;UBERON:0003295!2.83e-08!4;UBERON:0005562!2.83e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.18e-12;15!UBERON:0000179;7.18e-12;15!UBERON:0000463;7.18e-12;15!UBERON:0002390;1.01e-09;32!UBERON:0004177;1.00e-08;5!UBERON:0005057;1.00e-08;5!UBERON:0002370;6.67e-07;2!UBERON:0005058;6.67e-07;2!UBERON:0009113;6.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.70e-13,7;UBERON:0005057,1.70e-13,7;UBERON:0002370,7.14e-12,4;UBERON:0005058,7.14e-12,4;UBERON:0009113,7.14e-12,4;UBERON:0003295,7.14e-12,4;UBERON:0005562,7.14e-12,4;UBERON:0000178,1.01e-11,15;UBERON:0000179,1.01e-11,15;UBERON:0000463,1.01e-11,15;UBERON:0003351,6.89e-08,6;UBERON:0001042,8.92e-07,10;UBERON:0009145,8.92e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85732934148571,5.7470412614962,9.13045063238679,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,0.852139206383318,0.710846162437108,0,0,0,0.651032612147555,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,8.79981222306614,2.18455444504853,3.55803701545422,0.853460445133014,3.60356388332411,5.74752439954483,4.62731410949403,4.77026877267682,3.98449078376614,2.34894875748376,2.29363936875137,0,0,0,4.32761494250433,1.57204305099666,3.28962398399215,3.51091640320424,6.8443675993054,4.2610302516126,11.6896037044747,6.35039604245489,5.89211814949674,2.87994062958707,6.49929273036037,3.5865569523189,5.07231455483525,1.97325485524411,2.21080014228679,2.60822777161547,5.33831627383417,4.54819407752512,2.09071047609954,3.28597093822942,3.44898444241729,4.12352934579156,4.55435445635105,2.86708872891687,3.25541726928209,1.90090408889675,3.61380285786655,3.07167866770604,2.49861453104692,2.8413270245282,2.46338399076314,1.81446068902259,1.33720097891754,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60425719967636,1.57624608161542,2.15627574859517,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.2942852049117,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,2.62054953003568,1.23408681925858,0.648473311192717,3.24018862342869,3.17250070517708,0,0,0,3.90186667764009,0.144269212976445,3.34366663737546,0,0,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,9.23136040958021,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0.104421949505455,0,0,0,1.094728735294,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0,0,0,6.6835712782352,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.50374268767766,1.35361564744512,0.0999411559249289,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3297131639286,4.2831552864142,0,0.0636471582781649,0,0.217716747896961,0,2.02056159043763,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,1.81146414231924,4.80852738454849 | |||
|short_description=p5@FAIM3 | |||
}} |
Revision as of 23:50, 10 January 2014
Short description: | p5@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAIM3_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 0bp_to_ENST00000525793_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | E9PN59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.49e-75 | 53 |
common lymphoid progenitor | 2.49e-75 | 53 |
lymphoid lineage restricted progenitor cell | 7.04e-73 | 52 |
mature alpha-beta T cell | 3.16e-43 | 18 |
alpha-beta T cell | 3.16e-43 | 18 |
immature T cell | 3.16e-43 | 18 |
mature T cell | 3.16e-43 | 18 |
immature alpha-beta T cell | 3.16e-43 | 18 |
T cell | 6.24e-37 | 25 |
pro-T cell | 6.24e-37 | 25 |
nongranular leukocyte | 5.88e-35 | 115 |
leukocyte | 2.12e-32 | 136 |
lymphocyte of B lineage | 7.08e-30 | 24 |
pro-B cell | 7.08e-30 | 24 |
hematopoietic lineage restricted progenitor cell | 2.13e-26 | 120 |
CD8-positive, alpha-beta T cell | 7.42e-26 | 11 |
B cell | 7.72e-26 | 14 |
hematopoietic stem cell | 7.26e-24 | 168 |
hematopoietic cell | 5.01e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.42e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-20 | 161 |
CD4-positive, alpha-beta T cell | 2.41e-16 | 6 |
naive T cell | 1.92e-09 | 3 |
single nucleate cell | 5.54e-08 | 3 |
natural killer cell | 5.54e-08 | 3 |
mononuclear cell | 5.54e-08 | 3 |
pro-NK cell | 5.54e-08 | 3 |
regulatory T cell | 4.75e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.75e-07 | 2 |
naive regulatory T cell | 4.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.70e-13 | 7 |
immune organ | 1.70e-13 | 7 |
thymus | 7.14e-12 | 4 |
hemolymphoid system gland | 7.14e-12 | 4 |
thymic region | 7.14e-12 | 4 |
pharyngeal gland | 7.14e-12 | 4 |
thymus primordium | 7.14e-12 | 4 |
blood | 1.01e-11 | 15 |
haemolymphatic fluid | 1.01e-11 | 15 |
organism substance | 1.01e-11 | 15 |
pharyngeal epithelium | 6.89e-08 | 6 |
chordate pharynx | 8.92e-07 | 10 |
pharyngeal region of foregut | 8.92e-07 | 10 |