FFCP PHASE1:Hg19::chr1:202183185..202183196,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19719 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBX8 | |||
|association_with_transcript=-86bp_to_ENST00000439764,NM_001017404,uc001gxw.2_5end | |||
|description=CAGE_peak_6_at_LGR6_5end | |||
|id=chr1:202183185..202183196,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.94e-18;3!CL:0002178;1.94e-18;3!CL:0000349;1.44e-17;19!CL:0002537;7.26e-12;5!CL:1000415;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.24e-18,3;CL:0002178,3.30e-18,3;CL:0000349,1.17e-17,19;CL:0002537,7.07e-12,5;CL:1000415,7.52e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.74e-15;1 | |||
|ontology_enrichment_disease=DOID:305!3.20e-08!106;DOID:1749!3.44e-07!14;DOID:299!3.91e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.84e-14;1!DOID:1357;1.84e-14;1!DOID:299;9.43e-09;25!DOID:3493;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.75e-14,1;DOID:1357,2.75e-14,1;DOID:299,1.06e-08,25;DOID:3493,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.19e-18;3!UBERON:0007029;1.84e-14;1!UBERON:0001764;1.84e-14;1!UBERON:0001825;1.84e-14;1!UBERON:0001987;4.40e-14;4!UBERON:0000478;6.53e-14;24!UBERON:0005631;8.22e-13;10!UBERON:0000158;8.22e-13;10!UBERON:0000945;1.85e-11;5!UBERON:0010039;1.85e-11;5!UBERON:0000305;9.88e-09;7!UBERON:0002294;1.56e-08;7!UBERON:0001173;1.56e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.14e-24,14;UBERON:0000158,6.14e-24,14;UBERON:0002110,1.36e-18,3;UBERON:0006242,1.36e-18,3;UBERON:0003124,9.86e-18,7;UBERON:0007029,1.07e-14,1;UBERON:0001764,2.75e-14,1;UBERON:0001825,2.75e-14,1;UBERON:0001987,3.16e-14,4;UBERON:0004340,3.16e-14,4;UBERON:0000478,5.55e-14,24;UBERON:0000305,9.70e-09,7;UBERON:0004871,9.39e-08,8;UBERON:0000945,2.07e-07,8;UBERON:0010039,2.07e-07,8;UBERON:0002294,8.34e-07,9;UBERON:0001173,8.34e-07,9;UBERON:0004912,8.34e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.795178609928912,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,1.81434175997808,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0.146508179271894,0,0,0,7.40107902686839,0,6.75753544618311,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0.724999575434793,0.796554137998498,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0.697118721393016,0,0,0,0,0,2.87101043758728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.34823682632161,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,1.36885967914362,0,2.34798294213288,0.19980960958213,1.00863292007874,0,0,0.720273989940749,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,7.04815022316672,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,3.19170628885091,0,0,0,0,1.25643277000187,0,0.122026264901963,0,0,0.221858103073705,0,0,0.124980407962107,0,0.285465333544967,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.511049710558381,0,0.336283722218824,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0.22910686854405,0,0,0,1.27595303699816,0.609589624911347,0,0,0,1.94284397223656,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.534434810531121,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.445530107947154,0.202117188958219,0.217716747896961,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0.359300808426348,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@LGR6 | |||
}} |
Revision as of 23:23, 10 January 2014
Short description: | p6@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LGR6_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000439764, NM_001017404, uc001gxw.2_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | Q9HBX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.24e-18 | 3 |
epithelial cell of stomach | 3.30e-18 | 3 |
extraembryonic cell | 1.17e-17 | 19 |
amnion mesenchymal stem cell | 7.07e-12 | 5 |
epithelial cell of gall bladder | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.14e-24 | 14 |
membranous layer | 6.14e-24 | 14 |
gallbladder | 1.36e-18 | 3 |
gall bladder primordium | 1.36e-18 | 3 |
chorion | 9.86e-18 | 7 |
surface | 1.07e-14 | 1 |
maxillary sinus | 2.75e-14 | 1 |
paranasal sinus | 2.75e-14 | 1 |
placenta | 3.16e-14 | 4 |
allantois | 3.16e-14 | 4 |
extraembryonic structure | 5.55e-14 | 24 |
amnion | 9.70e-09 | 7 |
somatic layer of lateral plate mesoderm | 9.39e-08 | 8 |
stomach | 2.07e-07 | 8 |
food storage organ | 2.07e-07 | 8 |
biliary system | 8.34e-07 | 9 |
biliary tree | 8.34e-07 | 9 |
biliary bud | 8.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.75e-14 | 1 |
maxillary sinus cancer | 2.75e-14 | 1 |
adenocarcinoma | 1.06e-08 | 25 |
signet ring cell adenocarcinoma | 8.04e-08 | 2 |