FFCP PHASE1:Hg19::chr1:197237324..197237332,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2343 | |||
|TSSclassifier=strong | |||
|UniProt=P82279 | |||
|association_with_transcript=-1bp_to_NM_001193640,NM_201253_5end | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_5_at_CRB1_5end | |||
|id=chr1:197237324..197237332,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.62e-41;3!UBERON:0005425;1.61e-14;1!UBERON:0006601;3.52e-10;82!UBERON:0010122;6.57e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.86e-93!57;UBERON:0005068!9.86e-93!57;UBERON:0006241!9.86e-93!57;UBERON:0007135!9.86e-93!57;UBERON:0000073!3.76e-81!94;UBERON:0001016!3.76e-81!94;UBERON:0002616!2.37e-80!59;UBERON:0005743!2.24e-76!86;UBERON:0001017!8.24e-74!82;UBERON:0003075!9.44e-74!86;UBERON:0007284!9.44e-74!86;UBERON:0000955!1.26e-73!69;UBERON:0006238!1.26e-73!69;UBERON:0002346!5.45e-70!90;UBERON:0002780!6.30e-70!41;UBERON:0001890!6.30e-70!41;UBERON:0006240!6.30e-70!41;UBERON:0003080!4.26e-68!42;UBERON:0003056!4.21e-57!61;UBERON:0001893!1.37e-54!34;UBERON:0002020!2.39e-54!34;UBERON:0003528!2.39e-54!34;UBERON:0002791!9.27e-52!33;UBERON:0007023!3.48e-51!115;UBERON:0001869!2.15e-49!32;UBERON:0004121!7.12e-48!169;UBERON:0000033!1.16e-47!123;UBERON:0000924!1.71e-46!173;UBERON:0006601!1.71e-46!173;UBERON:0000153!6.15e-45!129;UBERON:0007811!6.15e-45!129;UBERON:0002619!3.44e-36!22;UBERON:0001950!2.94e-35!20;UBERON:0000956!3.21e-35!25;UBERON:0000203!3.21e-35!25;UBERON:0003076!2.32e-24!15;UBERON:0003057!2.32e-24!15;UBERON:0004732!1.36e-23!13;UBERON:0000025!3.60e-21!194;UBERON:0002308!5.80e-21!9;UBERON:0000125!5.80e-21!9;UBERON:0004733!1.13e-20!12;UBERON:0002028!1.13e-20!12;UBERON:0007277!1.13e-20!12;UBERON:0000200!2.27e-19!6;UBERON:0002298!2.41e-18!8;UBERON:0001894!1.21e-16!7;UBERON:0006222!1.21e-16!7;UBERON:0002420!2.19e-16!9;UBERON:0007245!2.19e-16!9;UBERON:0010009!2.19e-16!9;UBERON:0010011!2.19e-16!9;UBERON:0000454!2.19e-16!9;UBERON:0000483!9.60e-16!309;UBERON:0009663!1.50e-15!7;UBERON:0000119!1.78e-15!312;UBERON:0004111!5.88e-15!241;UBERON:0000064!5.28e-14!219;UBERON:0000369!6.74e-13!4;UBERON:0002435!6.74e-13!4;UBERON:0000204!6.74e-13!4;UBERON:0010082!6.74e-13!4;UBERON:0002680!8.52e-13!9;UBERON:0001895!8.52e-13!9;UBERON:0010092!8.52e-13!9;UBERON:0000477!1.39e-12!286;UBERON:0000475!2.95e-12!365;UBERON:0002771!6.82e-11!3;UBERON:0002021!2.16e-10!5;UBERON:0001872!2.27e-10!5;UBERON:0001896!2.48e-10!3;UBERON:0005290!2.48e-10!3;UBERON:0010096!2.48e-10!3;UBERON:0001871!2.83e-10!7;UBERON:0005383!3.51e-10!3;UBERON:0005382!3.51e-10!3;UBERON:0000988!5.99e-10!3;UBERON:0006331!8.95e-10!3;UBERON:0003296!2.31e-08!4;UBERON:0010133!2.31e-08!4;UBERON:0001905!3.51e-08!2;UBERON:0002757!3.51e-08!2;UBERON:0010134!3.51e-08!2;UBERON:0002784!3.51e-08!2;UBERON:0005408!3.51e-08!2;UBERON:0001899!3.51e-08!2;UBERON:0000062!4.39e-08!511;UBERON:0001873!1.02e-07!2;UBERON:0010122!1.02e-07!2;UBERON:0001897!1.09e-07!2;UBERON:0005162!1.09e-07!2;UBERON:0000122!1.09e-07!2;UBERON:0000481!1.21e-07!347;UBERON:0001870!2.87e-07!2;UBERON:0000922!3.12e-07!612;UBERON:0002148!3.36e-07!2;UBERON:0009662!3.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.40e-28;2!UBERON:0002757;5.40e-28;2!UBERON:0010134;5.40e-28;2!UBERON:0005408;5.40e-28;2!UBERON:0001899;5.40e-28;2!UBERON:0004732;1.29e-25;13!UBERON:0002037;7.78e-21;6!UBERON:0004733;3.73e-18;12!UBERON:0002028;3.73e-18;12!UBERON:0000941;1.61e-14;1!UBERON:0001785;1.61e-14;1!UBERON:0002464;1.61e-14;1!UBERON:0004904;1.61e-14;1!UBERON:0001021;1.61e-14;1!UBERON:0003296;1.61e-14;4!UBERON:0010133;1.61e-14;4!UBERON:0002784;1.61e-14;4!UBERON:0002680;4.14e-14;9!UBERON:0001895;4.14e-14;9!UBERON:0000073;8.24e-13;53!UBERON:0002616;8.24e-13;53!UBERON:0000955;8.76e-12;68!UBERON:0001017;1.49e-10;75!UBERON:0001016;4.05e-10;83!UBERON:0001894;1.09e-08;7!UBERON:0002780;1.32e-08;41!UBERON:0001890;1.32e-08;41!UBERON:0001876;6.57e-08;2!UBERON:0001873;6.57e-08;2!UBERON:0003714;6.57e-08;2!UBERON:0002702;6.57e-08;2!UBERON:0005162;6.57e-08;2!UBERON:0000122;6.57e-08;2!UBERON:0001869;5.25e-07;32!UBERON:0002420;8.84e-07;9!UBERON:0007245;8.84e-07;9!UBERON:0010009;8.84e-07;9!UBERON:0000010;8.84e-07;8!UBERON:0010011;8.84e-07;9!UBERON:0000454;8.84e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.41e-28,2;UBERON:0002757,5.41e-28,2;UBERON:0010134,5.41e-28,2;UBERON:0005408,5.41e-28,2;UBERON:0001899,5.41e-28,2;UBERON:0001049,5.69e-27,56;UBERON:0005068,5.69e-27,56;UBERON:0006241,5.69e-27,56;UBERON:0007135,5.69e-27,56;UBERON:0001016,8.92e-27,89;UBERON:0004732,1.58e-25,13;UBERON:0000073,1.56e-23,53;UBERON:0002616,1.56e-23,53;UBERON:0003076,3.71e-22,15;UBERON:0003057,3.71e-22,15;UBERON:0000955,8.91e-22,68;UBERON:0006238,8.91e-22,68;UBERON:0001017,9.68e-22,81;UBERON:0003075,1.05e-21,82;UBERON:0007284,1.05e-21,82;UBERON:0002037,8.91e-21,6;UBERON:0006215,8.91e-21,6;UBERON:0002346,1.19e-20,86;UBERON:0004733,4.66e-18,12;UBERON:0002028,4.66e-18,12;UBERON:0007277,4.66e-18,12;UBERON:0010371,6.98e-17,104;UBERON:0007023,1.79e-15,114;UBERON:0000941,1.41e-14,1;UBERON:0001785,1.41e-14,1;UBERON:0002464,1.41e-14,1;UBERON:0004904,1.41e-14,1;UBERON:0001021,1.41e-14,1;UBERON:0003902,1.41e-14,1;UBERON:0005425,1.41e-14,1;UBERON:0003296,1.61e-14,4;UBERON:0010133,1.61e-14,4;UBERON:0002784,1.61e-14,4;UBERON:0002680,4.53e-14,9;UBERON:0001895,4.53e-14,9;UBERON:0010092,4.53e-14,9;UBERON:0004121,1.84e-13,171;UBERON:0000924,1.84e-13,171;UBERON:0006601,1.84e-13,171;UBERON:0010314,4.88e-13,132;UBERON:0002780,3.79e-11,41;UBERON:0001890,3.79e-11,41;UBERON:0003080,3.79e-11,41;UBERON:0006240,3.79e-11,41;UBERON:0003056,5.44e-10,61;UBERON:0011216,6.07e-10,223;UBERON:0001894,1.09e-08,7;UBERON:0006222,1.09e-08,7;UBERON:0001873,5.02e-08,2;UBERON:0010122,5.02e-08,2;UBERON:0003714,6.15e-08,2;UBERON:0005162,6.15e-08,2;UBERON:0000122,6.15e-08,2;UBERON:0002702,6.58e-08,2;UBERON:0001876,7.03e-08,2;UBERON:0000025,4.72e-07,192;UBERON:0002420,8.10e-07,9;UBERON:0007245,8.10e-07,9;UBERON:0010009,8.10e-07,9;UBERON:0010011,8.10e-07,9;UBERON:0000454,8.10e-07,9;UBERON:0000010,9.64e-07,8 | |||
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|short_description=p5@CRB1 | |||
}} |
Revision as of 23:05, 10 January 2014
Short description: | p5@CRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CRB1_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | -1bp_to_NM_001193640, NM_201253_5end |
EntrezGene: | CRB1 |
HGNC: | 2343 |
UniProt: | P82279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data